RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 XDHP47989 1333 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 TAF1LQ8IZX4 1826 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 LY75O60449 1722 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 TSPY2A6NKD2 308 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 CASQ1P31415 396 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 CLCN6P51797 869 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 E2F4Q16254 413 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 TXNRD3Q86VQ6 643 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 BLZF1Q9H2G9 400 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
HIF3A-202ENST00000244303 ADD3Q9UEY8 706 aaKnown RBP16.32■□□□□ 0.2
HIF3A-202ENST00000244303 JAG2Q9Y219 1238 aa16.32■□□□□ 0.2
HIF3A-202ENST00000244303 TADA3O75528 432 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 MCM7P33993 719 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 NFIXQ14938 502 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 PFKFB3Q16875 520 aaPredicted RBP16.31■□□□□ 0.2
HIF3A-202ENST00000244303 IGSF22Q8N9C0 903 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 CTNND2Q9UQB3 1225 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 SOWAHDA6NJG2 315 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 PBX1P40424 430 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 RBL2Q08999 1139 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 IL17AQ16552 155 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 PANX2Q96RD6 677 aa16.31■□□□□ 0.2
HIF3A-202ENST00000244303 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-202ENST00000244303 COBLO75128 1261 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 KARSQ15046 597 aaKnown RBP16.3■□□□□ 0.2
HIF3A-202ENST00000244303 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 RCSD1Q6JBY9 416 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 PDXDC2PQ6P474 469 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 PPFIBP1Q86W92 1011 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 CPLX3Q8WVH0 158 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 CTAGE1Q96RT6 745 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
HIF3A-202ENST00000244303 LRRC4BQ9NT99 713 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 AFF2P51816 1311 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 IRS2Q9Y4H2 1338 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 EFCAB8A8MWE9 144 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 TRAPPC10P48553 1259 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 MAP3K9P80192 1104 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 SEPT12Q8IYM1 358 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 MCM9Q9NXL9 1143 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 SBF2Q86WG5 1849 aa16.3■□□□□ 0.2
HIF3A-202ENST00000244303 USP17L8P0C7I0 530 aa16.29■□□□□ 0.2
HIF3A-202ENST00000244303 MTRQ99707 1265 aa16.29■□□□□ 0.2
HIF3A-202ENST00000244303 TNRC6CQ9HCJ0 1690 aaKnown RBP16.29■□□□□ 0.2
HIF3A-202ENST00000244303 CCDC175P0C221 793 aa16.29■□□□□ 0.2
HIF3A-202ENST00000244303 GRAPQ13588 217 aa16.29■□□□□ 0.2
HIF3A-202ENST00000244303 FILIP1LQ4L180 1135 aa16.29■□□□□ 0.2
HIF3A-202ENST00000244303 RAD9BQ6WBX8 426 aa16.29■□□□□ 0.2
HIF3A-202ENST00000244303 GRAPLQ8TC17 118 aaPredicted RBP16.29■□□□□ 0.2
HIF3A-202ENST00000244303 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
HIF3A-202ENST00000244303 FAM205AQ6ZU69 1335 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 MFAP3LO75121 409 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 KIF5BP33176 963 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
HIF3A-202ENST00000244303 RRAGBQ5VZM2 374 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 GPKOWQ92917 476 aaPredicted RBP eCLIP16.28■□□□□ 0.2
HIF3A-202ENST00000244303 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 ANKIB1Q9P2G1 1089 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 ZBTB22O15209 634 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-202ENST00000244303 CASP14P31944 242 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 CCT6AP40227 531 aaKnown RBP16.28■□□□□ 0.2
HIF3A-202ENST00000244303 TFAP4Q01664 338 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 DZIP1Q86YF9 867 aaKnown RBP16.28■□□□□ 0.2
HIF3A-202ENST00000244303 BLIDQ8IZY5 108 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 NAA15Q9BXJ9 866 aaKnown RBP16.28■□□□□ 0.2
HIF3A-202ENST00000244303 IRX2Q9BZI1 471 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-202ENST00000244303 FHOD1Q9Y613 1164 aa16.28■□□□□ 0.2
HIF3A-202ENST00000244303 MYH1P12882 1939 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 GYPCP04921 128 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 CDC25AP30304 524 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 TAF3Q5VWG9 929 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 STAG2Q8N3U4 1231 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 PYM1Q9BRP8 204 aaKnown RBP16.27■□□□□ 0.2
HIF3A-202ENST00000244303 LZTFL1Q9NQ48 299 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 ARGLU1Q9NWB6 273 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-202ENST00000244303 LEMD3Q9Y2U8 911 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 ADGRG1Q9Y653 693 aa16.27■□□□□ 0.2
HIF3A-202ENST00000244303 NAV1Q8NEY1 1877 aa16.27■□□□□ 0.19
HIF3A-202ENST00000244303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
HIF3A-202ENST00000244303 A0A0U1RQJ8 604 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 ADRA2BP18089 450 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 CALML3P27482 149 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 KRT31Q15323 416 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 SPTY2D1Q68D10 685 aaPredicted RBP16.26■□□□□ 0.19
HIF3A-202ENST00000244303 C4orf32Q8N8J7 132 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 PNMA1Q8ND90 353 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 RASGRP4Q8TDF6 673 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
HIF3A-202ENST00000244303 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 EPC1Q9H2F5 836 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 ST7Q9NRC1 585 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms