RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 IGDCC4Q8TDY8 1250 aa10.36□□□□□ -0.75
SRSF6-201ENST00000244020 KRT23Q9C075 422 aa10.36□□□□□ -0.75
SRSF6-201ENST00000244020 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
SRSF6-201ENST00000244020 TSPOAP1O95153 1857 aa10.36□□□□□ -0.75
SRSF6-201ENST00000244020 DIP2AQ14689 1571 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 SEMA3EO15041 775 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 ARHGAP25P42331 645 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 AARSP49588 968 aaKnown RBP eCLIP10.35□□□□□ -0.75
SRSF6-201ENST00000244020 SF3A3Q12874 501 aaKnown RBP eCLIP10.35□□□□□ -0.755e-18■■■□□ 16.3
SRSF6-201ENST00000244020 DIXDC1Q155Q3 683 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 SEPT7Q16181 437 aaKnown RBP10.35□□□□□ -0.75
SRSF6-201ENST00000244020 NTRK3Q16288 839 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 MAATS1Q7Z4T9 603 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 MICAL1Q8TDZ2 1067 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 PSMB7Q99436 277 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 CNNM2Q9H8M5 875 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 ZNF185O15231 689 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 A1BGP04217 495 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 PHKG2P15735 406 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 ATP1A2P50993 1020 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 B4GALNT4Q76KP1 1039 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 SECISBP2LQ93073 1101 aaKnown RBP10.35□□□□□ -0.75
SRSF6-201ENST00000244020 TCP11X2Q5H9J9 407 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 TRAPPC11Q7Z392 1133 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 RSRC1Q96IZ7 334 aaKnown RBP10.35□□□□□ -0.75
SRSF6-201ENST00000244020 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
SRSF6-201ENST00000244020 TOPAZ1Q8N9V7 1692 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 HNRNPH1P31943 449 aaKnown RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 ADD2P35612 726 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 KRT2P35908 639 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 CASP7P55210 303 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 IFFO1Q0D2I5 559 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 UBE4AQ14139 1066 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 CDKAL1Q5VV42 579 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 CCNI2Q6ZMN8 369 aaPredicted RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 ANKLE2Q86XL3 938 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 FAM89AQ96GI7 184 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 EHD4Q9H223 541 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 ITIH6Q6UXX5 1313 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 TTC26A0AVF1 554 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 PAFAH1B1P43034 410 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 CUL4BQ13620 913 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 KCTD16Q68DU8 428 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 SUGP1Q8IWZ8 645 aaKnown RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 EEF2KMTQ96G04 330 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 FAM184BQ9ULE4 1060 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 TARSL2A2RTX5 802 aaKnown RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 PPP1R3GB7ZBB8 358 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 LIFRP42702 1097 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 DCAF5Q96JK2 942 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 JPH2Q9BR39 696 aaPredicted RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 RMND1Q9NWS8 449 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 AATFQ9NY61 560 aaKnown RBP eCLIP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 GOLGA8KD6RF30 607 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 RNF225M0QZC1 329 aaPredicted RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 PRPF6O94906 941 aaKnown RBP10.34□□□□□ -0.75
SRSF6-201ENST00000244020 MBD4O95243 580 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 MCAMP43121 646 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 AMPD2Q01433 879 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 SLC7A5Q01650 507 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 MSL1Q68DK7 614 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 FERMT2Q96AC1 680 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 CCDC42Q96M95 316 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 CEP83Q9Y592 693 aa10.34□□□□□ -0.75
SRSF6-201ENST00000244020 MRC1P22897 1456 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 LAMA4Q16363 1823 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 PSMD14O00487 310 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 PRDM1O75626 825 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 PBX1P40424 430 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 AKNAD1Q5T1N1 836 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 APTXQ7Z2E3 356 aaKnown RBP10.33□□□□□ -0.76
SRSF6-201ENST00000244020 SGMS1Q86VZ5 419 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 CRACR2BQ8N4Y2 399 aaPredicted RBP10.33□□□□□ -0.76
SRSF6-201ENST00000244020 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
SRSF6-201ENST00000244020 RBM28Q9NW13 759 aaKnown RBP10.33□□□□□ -0.76
SRSF6-201ENST00000244020 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 BMP15O95972 392 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 EPS15P42566 896 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 MAP3K12Q12852 859 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 AMOTL1Q8IY63 956 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 IFNL3Q8IZI9 196 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 TMTC2Q8N394 836 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 MAGEB6Q8N7X4 407 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 NBPF3Q9H094 633 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 CXorf56Q9H5V9 222 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 ARMT1Q9H993 441 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 RWDD2AQ9UIY3 292 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 TACC1O75410 805 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 PDE6AP16499 860 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 MCM7P33993 719 aa10.33□□□□□ -0.76
SRSF6-201ENST00000244020 DPYDQ12882 1025 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms