RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 NBPF11Q86T75 865 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 GLMNQ92990 594 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 CCDC17Q96LX7 622 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 TTC14Q96N46 770 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 TSKSQ9UJT2 592 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 IGF2BP3O00425 579 aaKnown RBP eCLIP10.85□□□□□ -0.67
TGFB3-201ENST00000238682 GJA5P36382 358 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 TAF1CQ15572 869 aaPredicted RBP10.85□□□□□ -0.67
TGFB3-201ENST00000238682 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 PRAMEF18Q5VWM3 479 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 C16orf86Q6ZW13 317 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 BRI3BPQ8WY22 251 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 ANKS1AQ92625 1134 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 CLMNQ96JQ2 1002 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 JAKMIP1Q96N16 626 aaKnown RBP10.85□□□□□ -0.67
TGFB3-201ENST00000238682 EFCC1Q9HA90 598 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 PICK1Q9NRD5 415 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 GEMIN8Q9NWZ8 242 aaKnown RBP10.85□□□□□ -0.67
TGFB3-201ENST00000238682 ADGRA2Q96PE1 1338 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 DOCK1Q14185 1865 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 LIFRP42702 1097 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 TAGLNQ01995 201 aaKnown RBP10.85□□□□□ -0.67
TGFB3-201ENST00000238682 MB21D2Q8IYB1 491 aaPredicted RBP10.85□□□□□ -0.67
TGFB3-201ENST00000238682 GPATCH11Q8N954 259 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 INTS4Q96HW7 963 aaKnown RBP10.85□□□□□ -0.67
TGFB3-201ENST00000238682 MAP3K14Q99558 947 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 TSPYL1Q9H0U9 437 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 AS3MTQ9HBK9 375 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 PDRG1Q9NUG6 133 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
TGFB3-201ENST00000238682 TLR2O60603 784 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 PSEN1P49768 467 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 CRHR2Q13324 411 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 DNTTIP2Q5QJE6 756 aaKnown RBP10.84□□□□□ -0.67
TGFB3-201ENST00000238682 DNAJC14Q6Y2X3 702 aaPredicted RBP10.84□□□□□ -0.67
TGFB3-201ENST00000238682 OTOP1Q7RTM1 612 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 GOPCQ9HD26 462 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 PI4KBQ9UBF8 816 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 PALD1Q9ULE6 856 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 K7ELQ4 463 aaPredicted RBP10.84□□□□□ -0.67
TGFB3-201ENST00000238682 POLR3DP05423 398 aaPredicted RBP10.84□□□□□ -0.67
TGFB3-201ENST00000238682 CASTP20810 708 aaKnown RBP10.84□□□□□ -0.67
TGFB3-201ENST00000238682 ZNF274Q96GC6 653 aaPredicted RBP10.84□□□□□ -0.67
TGFB3-201ENST00000238682 MCM9Q9NXL9 1143 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
TGFB3-201ENST00000238682 A0A0G2JLL6 359 aaPredicted RBP10.83□□□□□ -0.68
TGFB3-201ENST00000238682 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
TGFB3-201ENST00000238682 DPH6Q7L8W6 267 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 PRRT2Q7Z6L0 340 aaPredicted RBP10.83□□□□□ -0.68
TGFB3-201ENST00000238682 NKX2-3Q8TAU0 364 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 TGFBRAP1Q8WUH2 860 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 GDPD2Q9HCC8 539 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 KCNG1Q9UIX4 513 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 GREB1LQ9C091 1923 aaPredicted RBP10.83□□□□□ -0.68
TGFB3-201ENST00000238682 USP17L12C9JPN9 530 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 USP17L21D6R901 530 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 PRKAB2O43741 272 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 CALM1P0DP23 149 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 CALM2P0DP24 149 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 CALM3P0DP25 149 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 NOVP48745 357 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 NEK4P51957 841 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 GABPAQ06546 454 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 SGMS1Q86VZ5 419 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 PCMTD1Q96MG8 357 aaPredicted RBP10.83□□□□□ -0.68
TGFB3-201ENST00000238682 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
TGFB3-201ENST00000238682 ERICH2A1L162 156 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 PARNO95453 639 aaKnown RBP10.82□□□□□ -0.68
TGFB3-201ENST00000238682 CHGBP05060 677 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 FECHP22830 423 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 CUL4AQ13619 759 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 PRKG1Q13976 671 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 NBPF20Q3BBV1 942 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 IQCA1Q86XH1 822 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 DGKHQ86XP1 1220 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 SDR42E1Q8WUS8 393 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 LLPHQ9BRT6 129 aaKnown RBP10.82□□□□□ -0.68
TGFB3-201ENST00000238682 JAG2Q9Y219 1238 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 TRIM17Q9Y577 477 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 LOC285556D6RIA3 1793 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 GCLCP48506 637 aaPredicted RBP10.82□□□□□ -0.68
TGFB3-201ENST00000238682 SLFNL1Q499Z3 407 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 TRMT44Q8IYL2 757 aaKnown RBP10.82□□□□□ -0.68
TGFB3-201ENST00000238682 NBPF3Q9H094 633 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
TGFB3-201ENST00000238682 DHX16O60231 1041 aaKnown RBP10.81□□□□□ -0.68
TGFB3-201ENST00000238682 NUBP1P53384 320 aa10.81□□□□□ -0.68
TGFB3-201ENST00000238682 SH3D19Q5HYK7 790 aa10.81□□□□□ -0.68
TGFB3-201ENST00000238682 C17orf99Q6UX52 265 aa10.81□□□□□ -0.68
TGFB3-201ENST00000238682 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
TGFB3-201ENST00000238682 PTPN18Q99952 460 aa10.81□□□□□ -0.68
TGFB3-201ENST00000238682 WDR18Q9BV38 432 aa10.81□□□□□ -0.68
TGFB3-201ENST00000238682 BAZ2AQ9UIF9 1905 aaKnown RBP10.81□□□□□ -0.68
TGFB3-201ENST00000238682 PHF20L1A8MW92 1017 aa10.81□□□□□ -0.68
TGFB3-201ENST00000238682 FCGRTP55899 365 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms