RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 WDR46O15213 610 aaKnown RBP11.88□□□□□ -0.51
HMGCL-201ENST00000235958 ZBTB43O43298 467 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 SNHG28P0DPA3 235 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 VCAM1P19320 739 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 PDIA3P30101 505 aaKnown RBP11.88□□□□□ -0.51
HMGCL-201ENST00000235958 HOXA7P31268 230 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 ANKRD1Q15327 319 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 FAM83BQ5T0W9 1011 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 APOA5Q6Q788 366 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 CATSPERGQ6ZRH7 1159 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 KCTD1Q719H9 257 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 RASGRP2Q7LDG7 609 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 RAB11FIP4Q86YS3 637 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 FANCBQ8NB91 859 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 DCAF4Q8WV16 495 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-201ENST00000235958 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 TPCN1Q9ULQ1 816 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 AGTPBP1Q9UPW5 1226 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 PALM3A6NDB9 673 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-201ENST00000235958 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 PDHXO00330 501 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 ST18O60284 1047 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
HMGCL-201ENST00000235958 GOLGA8HP0CJ92 632 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 CALM1P0DP23 149 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 CALM2P0DP24 149 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 CALM3P0DP25 149 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 RXRAP19793 462 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 ZNF543Q08ER8 600 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 SREBF2Q12772 1141 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 COG2Q14746 738 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 NOL8Q76FK4 1167 aaKnown RBP11.87□□□□□ -0.51
HMGCL-201ENST00000235958 ANKRD23Q86SG2 305 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 CCDC144CPQ8IYA2 1237 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-201ENST00000235958 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 CHURC1Q8WUH1 139 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 MAP3K14Q99558 947 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
HMGCL-201ENST00000235958 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 HOXC10Q9NYD6 342 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
HMGCL-201ENST00000235958 FRMPD2Q68DX3 1309 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 KLRF2D3W0D1 207 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 IGF2BP3O00425 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 DDAH1O94760 285 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 ADD1P35611 737 aaKnown RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 SLC16A2P36021 539 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 CCT2P78371 535 aaKnown RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■■■□□ 15.2
HMGCL-201ENST00000235958 GRM4Q14833 912 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 CCDC96Q2M329 555 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 MICU3Q86XE3 530 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 PRPF38AQ8NAV1 312 aaKnown RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 FAM217BQ9NTX9 383 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 FEM1BQ9UK73 627 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 ISY1Q9ULR0 285 aaKnown RBP11.86□□□□□ -0.51
HMGCL-201ENST00000235958 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
HMGCL-201ENST00000235958 PLA2G6O60733 806 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 FLOT1O75955 427 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
HMGCL-201ENST00000235958 OSBPP22059 807 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 KIF5BP33176 963 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 GNAQP50148 359 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 STK3Q13188 491 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 ME3Q16798 604 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 RTN1Q16799 776 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 ASPRV1Q53RT3 343 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-201ENST00000235958 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 CTCFLQ8NI51 663 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-201ENST00000235958 CPVLQ9H3G5 476 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
HMGCL-201ENST00000235958 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 PFKFB2O60825 505 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 CYP2C8P10632 490 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 CDC27P30260 824 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 DSG3P32926 999 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 METAP2P50579 478 aaKnown RBP eCLIP11.84□□□□□ -0.51
HMGCL-201ENST00000235958 STAT2P52630 851 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 RCAN1P53805 252 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 IRX3P78415 501 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-201ENST00000235958 IKQ13123 557 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms