RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
HCFC2-201ENST00000229330 UGGT1Q9NYU2 1555 aa15.27■□□□□ 0.04
HCFC2-201ENST00000229330 GUCY2CP25092 1073 aa15.27■□□□□ 0.03
HCFC2-201ENST00000229330 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.03
HCFC2-201ENST00000229330 CHD1O14646 1710 aa15.27■□□□□ 0.03
HCFC2-201ENST00000229330 BUB1O43683 1085 aa15.27■□□□□ 0.03
HCFC2-201ENST00000229330 ALS2CLQ60I27 953 aa15.27■□□□□ 0.03
HCFC2-201ENST00000229330 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 ST5P78524 1137 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 UAP1Q16222 522 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 SRLQ86TD4 932 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 CCDC105Q8IYK2 499 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 NLRC4Q9NPP4 1024 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 TXNDC9O14530 226 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 KIF1CO43896 1103 aaKnown RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 PPP2R5BQ15173 497 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 MRRFQ96E11 262 aaKnown RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 MLH3Q9UHC1 1453 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 ZCCHC11Q5TAX3 1644 aaKnown RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 LOC102724159A0A0B4J2E5 919 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 PWP2Q15269 919 aaKnown RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 TRMT1LQ7Z2T5 733 aaKnown RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.26■□□□□ 0.03
HCFC2-201ENST00000229330 PPP6R2O75170 966 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 RESTQ13127 1097 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 CFAP157Q5JU67 520 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 RASIP1Q5U651 963 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 ANKRD20A3Q5VUR7 823 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 SEPT14Q6ZU15 432 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 CEP120Q8N960 986 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 KCNF1Q9H3M0 494 aa15.26■□□□□ 0.03
HCFC2-201ENST00000229330 PPP2R5EQ16537 467 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 MAP7D1Q3KQU3 841 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 ACRBPQ8NEB7 543 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 PANX2Q96RD6 677 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 FTOQ9C0B1 505 aaKnown RBP eCLIP15.25■□□□□ 0.03
HCFC2-201ENST00000229330 ARHGEF10O15013 1369 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 CCDC169A6NNP5 214 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 NSUN7Q8NE18 718 aaKnown RBP15.25■□□□□ 0.03
HCFC2-201ENST00000229330 DDX17Q92841 729 aaKnown RBP15.25■□□□□ 0.03
HCFC2-201ENST00000229330 METTL22Q9BUU2 404 aaPredicted RBP15.25■□□□□ 0.03
HCFC2-201ENST00000229330 DNAI2Q9GZS0 605 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 SUN1O94901 812 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 OSBPL5Q9H0X9 879 aaPredicted RBP15.25■□□□□ 0.03
HCFC2-201ENST00000229330 ST7Q9NRC1 585 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 AMFRQ9UKV5 643 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 CASQ2O14958 399 aaPredicted RBP15.25■□□□□ 0.03
HCFC2-201ENST00000229330 KRT15P19012 456 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 C2orf54Q08AI8 447 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 LINC00301Q8NCQ3 95 aa15.25■□□□□ 0.03
HCFC2-201ENST00000229330 GSTO1P78417 241 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 EAF2Q96CJ1 260 aaPredicted RBP15.24■□□□□ 0.03
HCFC2-201ENST00000229330 NCAPGQ9BPX3 1015 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 DPH5Q9H2P9 285 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 CTTNBP2NLQ9P2B4 639 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 NCAPH2Q6IBW4 605 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 KRT12Q99456 494 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 SYNCQ9H7C4 482 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 CTIFO43310 598 aaKnown RBP15.24■□□□□ 0.03
HCFC2-201ENST00000229330 LARSQ9P2J5 1176 aaKnown RBP15.24■□□□□ 0.03
HCFC2-201ENST00000229330 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 METP08581 1390 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 SYNMO15061 1565 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 CYP2E1P05181 493 aaPredicted RBP15.24■□□□□ 0.03
HCFC2-201ENST00000229330 ERCC3P19447 782 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 SLC52A2Q9HAB3 445 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 EPB41L5Q9HCM4 733 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 ZMYM6O95789 1325 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 TROVE2P10155 538 aaKnown RBP eCLIP15.24■□□□□ 0.03
HCFC2-201ENST00000229330 NR1D1P20393 614 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 HELBQ8NG08 1087 aaPredicted RBP15.24■□□□□ 0.03
HCFC2-201ENST00000229330 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 INTS9Q9NV88 658 aaKnown RBP15.24■□□□□ 0.03
HCFC2-201ENST00000229330 FAM184BQ9ULE4 1060 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 LMTK3Q96Q04 1460 aa15.24■□□□□ 0.03
HCFC2-201ENST00000229330 TAF5LO75529 589 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 HEXIM1O94992 359 aaKnown RBP15.23■□□□□ 0.03
HCFC2-201ENST00000229330 ATP1A3P13637 1013 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 INF2Q27J81 1249 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 HIBCHQ6NVY1 386 aaPredicted RBP15.23■□□□□ 0.03
HCFC2-201ENST00000229330 PLBD2Q8NHP8 589 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 FRMD4BQ9Y2L6 1034 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
HCFC2-201ENST00000229330 SESN3P58005 492 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 CARMIL3Q8ND23 1372 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 ENOX1Q8TC92 643 aaKnown RBP15.23■□□□□ 0.03
HCFC2-201ENST00000229330 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
HCFC2-201ENST00000229330 MYOM2P54296 1465 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 PSMC4P43686 418 aa15.23■□□□□ 0.03
HCFC2-201ENST00000229330 CCNT1O60563 726 aaKnown RBP15.22■□□□□ 0.03
HCFC2-201ENST00000229330 ADD1P35611 737 aaKnown RBP15.22■□□□□ 0.03
HCFC2-201ENST00000229330 KIF2CQ99661 725 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 ARMT1Q9H993 441 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 VPS54Q9P1Q0 977 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 CABP7Q86V35 215 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 EFCAB6Q5THR3 1501 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 CALUO43852 315 aaPredicted RBP15.22■□□□□ 0.03
HCFC2-201ENST00000229330 OPHN1O60890 802 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 GSDMAQ96QA5 445 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms