RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MB21D1Q8N884 522 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 DPF3Q92784 378 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 CEP95Q96GE4 821 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 INCENPQ9NQS7 918 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 PLXNB2O15031 1838 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 NDUFB10O96000 172 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 TFAP4Q01664 338 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 TMEM132BQ14DG7 1078 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 NPLOC4Q8TAT6 608 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 CRISPLD2Q9H0B8 497 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 MTMR4Q9NYA4 1195 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 FLRT1Q9NZU1 646 aa16.92■□□□□ 0.3
GPN3-201ENST00000228827 KIAA0100Q14667 2235 aaKnown RBP16.91■□□□□ 0.3
GPN3-201ENST00000228827 MAP3K21Q5TCX8 1036 aa16.91■□□□□ 0.3
GPN3-201ENST00000228827 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
GPN3-201ENST00000228827 LRRC47Q8N1G4 583 aaKnown RBP16.91■□□□□ 0.3
GPN3-201ENST00000228827 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
GPN3-201ENST00000228827 PPP1R9AQ9ULJ8 1098 aa16.91■□□□□ 0.3
GPN3-201ENST00000228827 MYH8P13535 1937 aa16.91■□□□□ 0.3
GPN3-201ENST00000228827 TTLL1O95922 423 aa16.9■□□□□ 0.3
GPN3-201ENST00000228827 ADORA2AP29274 412 aa16.9■□□□□ 0.3
GPN3-201ENST00000228827 CCND3P30281 292 aaPredicted RBP16.9■□□□□ 0.3
GPN3-201ENST00000228827 DPP9Q86TI2 863 aa16.9■□□□□ 0.3
GPN3-201ENST00000228827 SHCBP1Q8NEM2 672 aa16.9■□□□□ 0.3
GPN3-201ENST00000228827 NEDD1Q8NHV4 660 aa16.9■□□□□ 0.3
GPN3-201ENST00000228827 DIS3LQ8TF46 1054 aaKnown RBP16.9■□□□□ 0.3
GPN3-201ENST00000228827 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
GPN3-201ENST00000228827 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
GPN3-201ENST00000228827 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 VWA5AO00534 786 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 MFSD14CQ5VZR4 134 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 PAWRQ96IZ0 340 aaKnown RBP16.89■□□□□ 0.29
GPN3-201ENST00000228827 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 HTATIP2Q9BUP3 242 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 MROH8Q9H579 483 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
GPN3-201ENST00000228827 ADAMTS5Q9UNA0 930 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
GPN3-201ENST00000228827 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.29
GPN3-201ENST00000228827 STRNO43815 780 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
GPN3-201ENST00000228827 FGAP02671 866 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 HOXC6P09630 235 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
GPN3-201ENST00000228827 SDSP20132 328 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 CYP2C19P33261 490 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 ALX1Q15699 326 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 MKL1Q969V6 931 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 DOCK3Q8IZD9 2030 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 CCDC171Q6TFL3 1326 aa16.88■□□□□ 0.29
GPN3-201ENST00000228827 A0A0G2JMZ2 1700 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 H0YGN5 161 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 NMT2O60551 498 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 COBLO75128 1261 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 SLC25A27O95847 323 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 STAT3P40763 770 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
GPN3-201ENST00000228827 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
GPN3-201ENST00000228827 GREB1LQ9C091 1923 aaPredicted RBP16.87■□□□□ 0.29
GPN3-201ENST00000228827 CAPN2P17655 700 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 CNGA1P29973 690 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 HAND2P61296 217 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 SLFN13Q68D06 897 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 CWC27Q6UX04 472 aaKnown RBP16.86■□□□□ 0.29
GPN3-201ENST00000228827 NECAB2Q7Z6G3 386 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 RIOX2Q8IUF8 465 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 GMCL1P1Q8NEA9 526 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 KIFC2Q96AC6 838 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 OGDHLQ9ULD0 1010 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 STX8Q9UNK0 236 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 CTDP1Q9Y5B0 961 aaPredicted RBP16.86■□□□□ 0.29
GPN3-201ENST00000228827 FCER1AP12319 257 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 PDE4AP27815 886 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 ANKLE1Q8NAG6 615 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
GPN3-201ENST00000228827 MMP19Q99542 508 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 IL17RBQ9NRM6 502 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 DIAPH3Q9NSV4 1193 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 ZNF214Q9UL59 606 aaPredicted RBP16.86■□□□□ 0.29
GPN3-201ENST00000228827 MTMR7Q9Y216 660 aa16.86■□□□□ 0.29
GPN3-201ENST00000228827 RLFQ13129 1914 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 ZBED4O75132 1171 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 PGK2P07205 417 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 BMP3P12645 472 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 MNX1P50219 401 aaPredicted RBP16.85■□□□□ 0.29
GPN3-201ENST00000228827 MFAP1P55081 439 aaKnown RBP16.85■□□□□ 0.29
GPN3-201ENST00000228827 LHX8Q68G74 356 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 SNRNP48Q6IEG0 339 aaKnown RBP16.85■□□□□ 0.29
GPN3-201ENST00000228827 ABRAQ8N0Z2 381 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 CPXCR1Q8N123 301 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 FEM1BQ9UK73 627 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 SYNPO2Q9UMS6 1093 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 PDE4DIPQ5VU43 2346 aa16.85■□□□□ 0.29
GPN3-201ENST00000228827 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms