RNA–Protein interactions for RNA: ENST00000228136.8

C11orf58-201, Transcript of chromosome 11 open reading frame 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf58, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-201ENST00000228136 ZNF543Q08ER8 600 aa20.9■□□□□ 0.94
C11orf58-201ENST00000228136 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
C11orf58-201ENST00000228136 SLFN13Q68D06 897 aa20.9■□□□□ 0.94
C11orf58-201ENST00000228136 KRT40Q6A162 431 aa20.9■□□□□ 0.94
C11orf58-201ENST00000228136 ZKSCAN4Q969J2 545 aaPredicted RBP20.9■□□□□ 0.94
C11orf58-201ENST00000228136 CTNND1O60716 968 aaKnown RBP20.89■□□□□ 0.93
C11orf58-201ENST00000228136 ZYXQ15942 572 aaKnown RBP20.89■□□□□ 0.93
C11orf58-201ENST00000228136 SUPT20HL1Q3ZLR7 823 aa20.89■□□□□ 0.93
C11orf58-201ENST00000228136 TTBK2Q6IQ55 1244 aa20.89■□□□□ 0.93
C11orf58-201ENST00000228136 CLEC17AQ6ZS10 378 aa20.89■□□□□ 0.93
C11orf58-201ENST00000228136 USP48Q86UV5 1035 aa20.89■□□□□ 0.93
C11orf58-201ENST00000228136 SPICE1Q8N0Z3 855 aa20.89■□□□□ 0.93
C11orf58-201ENST00000228136 ZC3H15Q8WU90 426 aaKnown RBP20.89■□□□□ 0.93
C11orf58-201ENST00000228136 SHISA4Q96DD7 197 aa20.89■□□□□ 0.93
C11orf58-201ENST00000228136 NUP88Q99567 741 aaPredicted RBP20.89■□□□□ 0.93
C11orf58-201ENST00000228136 NDUFB10O96000 172 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 MCM4P33991 863 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 SLC1A4P43007 532 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 RESTQ13127 1097 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 SPZ1Q9BXG8 430 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 VAT1LQ9HCJ6 419 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 VPS54Q9P1Q0 977 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 ZNF112Q9UJU3 913 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 KCNJ14Q9UNX9 436 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 TRIM29Q14134 588 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 KIAA1755Q5JYT7 1200 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 GMCL1P1Q8NEA9 526 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 LZTS2Q9BRK4 669 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 TMX2Q9Y320 296 aa20.88■□□□□ 0.93
C11orf58-201ENST00000228136 SLC16A2P36021 539 aa20.87■□□□□ 0.93
C11orf58-201ENST00000228136 PNMA8AQ86V59 439 aaPredicted RBP20.87■□□□□ 0.93
C11orf58-201ENST00000228136 HOMER1Q86YM7 354 aa20.87■□□□□ 0.93
C11orf58-201ENST00000228136 KLRG1Q96E93 195 aa20.87■□□□□ 0.93
C11orf58-201ENST00000228136 OTOFQ9HC10 1997 aa20.87■□□□□ 0.93
C11orf58-201ENST00000228136 SCG2P13521 617 aa20.87■□□□□ 0.93
C11orf58-201ENST00000228136 PFKFB3Q16875 520 aaPredicted RBP20.87■□□□□ 0.93
C11orf58-201ENST00000228136 GPATCH4Q5T3I0 446 aaKnown RBP20.87■□□□□ 0.93
C11orf58-201ENST00000228136 DCAF4Q8WV16 495 aa20.87■□□□□ 0.93
C11orf58-201ENST00000228136 GPKOWQ92917 476 aaPredicted RBP eCLIP20.87■□□□□ 0.93
C11orf58-201ENST00000228136 KIF28PB7ZC32 967 aa20.86■□□□□ 0.93
C11orf58-201ENST00000228136 DNM1Q05193 864 aaKnown RBP20.86■□□□□ 0.93
C11orf58-201ENST00000228136 SCYL3Q8IZE3 742 aa20.86■□□□□ 0.93
C11orf58-201ENST00000228136 RRAGCQ9HB90 399 aa20.86■□□□□ 0.93
C11orf58-201ENST00000228136 CLEC11AQ9Y240 323 aa20.86■□□□□ 0.93
C11orf58-201ENST00000228136 PHIPQ8WWQ0 1821 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 USP2O75604 605 aaPredicted RBP20.85■□□□□ 0.93
C11orf58-201ENST00000228136 CDCA5Q96FF9 252 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 GMCL1Q96IK5 515 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 PIGSQ96S52 555 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 ATP6V1DQ9Y5K8 247 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 KIF23Q02241 960 aaPredicted RBP20.85■□□□□ 0.93
C11orf58-201ENST00000228136 ZNF526Q8TF50 670 aaPredicted RBP20.85■□□□□ 0.93
C11orf58-201ENST00000228136 RIOX1Q9H6W3 641 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 GDPD2Q9HCC8 539 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 GOPCQ9HD26 462 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.85■□□□□ 0.93
C11orf58-201ENST00000228136 RBM27Q9P2N5 1060 aaKnown RBP20.85■□□□□ 0.93
C11orf58-201ENST00000228136 CNPY2Q9Y2B0 182 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 PAPPA2Q9BXP8 1791 aa20.85■□□□□ 0.93
C11orf58-201ENST00000228136 MMP1P03956 469 aa20.84■□□□□ 0.93
C11orf58-201ENST00000228136 NCLP19338 710 aaKnown RBP20.84■□□□□ 0.93
C11orf58-201ENST00000228136 ADGRF4Q8IZF3 695 aa20.84■□□□□ 0.93
C11orf58-201ENST00000228136 FEZ1Q99689 392 aa20.84■□□□□ 0.93
C11orf58-201ENST00000228136 ZSCAN16Q9H4T2 348 aaPredicted RBP20.84■□□□□ 0.93
C11orf58-201ENST00000228136 SYNPO2Q9UMS6 1093 aa20.84■□□□□ 0.93
C11orf58-201ENST00000228136 SMARCA1P28370 1054 aa20.83■□□□□ 0.93
C11orf58-201ENST00000228136 DGKZQ13574 1117 aa20.83■□□□□ 0.93
C11orf58-201ENST00000228136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.83■□□□□ 0.936e-6■□□□□ 9
C11orf58-201ENST00000228136 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.93
C11orf58-201ENST00000228136 VCPKMTQ9H867 229 aa20.83■□□□□ 0.93
C11orf58-201ENST00000228136 BMP3P12645 472 aa20.83■□□□□ 0.92
C11orf58-201ENST00000228136 MAP1SQ66K74 1059 aaPredicted RBP20.83■□□□□ 0.92
C11orf58-201ENST00000228136 WWC2Q6AWC2 1192 aa20.83■□□□□ 0.92
C11orf58-201ENST00000228136 HEATR3Q7Z4Q2 680 aa20.83■□□□□ 0.92
C11orf58-201ENST00000228136 SH2D4AQ9H788 454 aa20.83■□□□□ 0.92
C11orf58-201ENST00000228136 JMJD4Q9H9V9 463 aa20.83■□□□□ 0.92
C11orf58-201ENST00000228136 PICK1Q9NRD5 415 aa20.83■□□□□ 0.92
C11orf58-201ENST00000228136 GINM1Q9NU53 330 aa20.83■□□□□ 0.92
C11orf58-201ENST00000228136 USP17L10C9JJH3 530 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 TMEM232C9JQI7 657 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 XBP1P17861 261 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 PTPRAP18433 802 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 FAM83BQ5T0W9 1011 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 TYW1BQ6NUM6 668 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 SEC63Q9UGP8 760 aaKnown RBP20.82■□□□□ 0.92
C11orf58-201ENST00000228136 BTBD18B2RXH4 712 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 PPP1R12BO60237 982 aaPredicted RBP20.82■□□□□ 0.92
C11orf58-201ENST00000228136 IKQ13123 557 aaPredicted RBP20.82■□□□□ 0.92
C11orf58-201ENST00000228136 GNL2Q13823 731 aaKnown RBP20.82■□□□□ 0.92
C11orf58-201ENST00000228136 MOB2Q70IA6 237 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 DIS3L2Q8IYB7 885 aaKnown RBP20.82■□□□□ 0.92
C11orf58-201ENST00000228136 RGS22Q8NE09 1264 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 OXER1Q8TDS5 423 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 PHF20Q9BVI0 1012 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 NMRK2Q9NPI5 230 aa20.82■□□□□ 0.92
C11orf58-201ENST00000228136 FIBPO43427 364 aa20.81■□□□□ 0.92
C11orf58-201ENST00000228136 FMR1Q06787 632 aaKnown RBP eCLIP20.81■□□□□ 0.92
C11orf58-201ENST00000228136 MTMR2Q13614 643 aa20.81■□□□□ 0.92
C11orf58-201ENST00000228136 VGLL4Q14135 290 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms