RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 GRIN2DO15399 1336 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 SYNRGQ9UMZ2 1314 aa15.86■□□□□ 0.13
SF1-201ENST00000227503 ANKRD36CQ5JPF3 1778 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 TOB1P50616 345 aaPredicted RBP15.85■□□□□ 0.13
SF1-201ENST00000227503 PLCD1P51178 756 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 PPARAQ07869 468 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 KCTD16Q68DU8 428 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 SH2D3CQ8N5H7 860 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 HELBQ8NG08 1087 aaPredicted RBP15.85■□□□□ 0.13
SF1-201ENST00000227503 SLAIN2Q9P270 581 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 ZBTB1Q9Y2K1 713 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 LRP5O75197 1615 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 GOLGA6BA6NDN3 693 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
SF1-201ENST00000227503 CTDSPL2Q05D32 466 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 SPATA5Q8NB90 893 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 SLC26A6Q9BXS9 759 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 TAB2Q9NYJ8 693 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 TTF2Q9UNY4 1162 aaKnown RBP15.85■□□□□ 0.13
SF1-201ENST00000227503 PCDHB6Q9Y5E3 794 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 A0A087X0B3 334 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 FMNL1O95466 1100 aaPredicted RBP15.85■□□□□ 0.13
SF1-201ENST00000227503 MATR3P43243 847 aaKnown RBP eCLIP15.85■□□□□ 0.13
SF1-201ENST00000227503 NR5A1Q13285 461 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 SND1Q7KZF4 910 aaKnown RBP eCLIP15.85■□□□□ 0.13
SF1-201ENST00000227503 CTCFLQ8NI51 663 aaPredicted RBP15.85■□□□□ 0.13
SF1-201ENST00000227503 ABHD10Q9NUJ1 306 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 MAPK8IP1Q9UQF2 711 aa15.85■□□□□ 0.13
SF1-201ENST00000227503 ITGB4P16144 1822 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 ZEB2O60315 1214 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 SHOX2O60902 331 aaPredicted RBP15.84■□□□□ 0.13
SF1-201ENST00000227503 MBD4O95243 580 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 PBX1P40424 430 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 TRIM29Q14134 588 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 MAP9Q49MG5 647 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 CAGE1Q8TC20 777 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 ARL8AQ96BM9 186 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 DONSONQ9NYP3 566 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 SMARCAL1Q9NZC9 954 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 SLC12A7Q9Y666 1083 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 MYH13Q9UKX3 1938 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 MROH5Q6ZUA9 1318 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 NID2Q14112 1375 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
SF1-201ENST00000227503 MYO1BO43795 1136 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 SARSP49591 514 aaKnown RBP15.84■□□□□ 0.13
SF1-201ENST00000227503 SLC7A5Q01650 507 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
SF1-201ENST00000227503 RASGRF1Q13972 1273 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 DHX37Q8IY37 1157 aaKnown RBP15.84■□□□□ 0.13
SF1-201ENST00000227503 NAPBQ9H115 298 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 CENPHQ9H3R5 247 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 CTNND2Q9UQB3 1225 aa15.84■□□□□ 0.13
SF1-201ENST00000227503 GSG1L2A8MUP6 293 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 BCL9O00512 1426 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 N4BP3O15049 544 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 IFNAR1P17181 557 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 KRT9P35527 623 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 TRAPPC11Q7Z392 1133 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 EPSTI1Q96J88 318 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 PSMB7Q99436 277 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 ARMT1Q9H993 441 aa15.83■□□□□ 0.13
SF1-201ENST00000227503 GNL3LQ9NVN8 582 aaKnown RBP15.83■□□□□ 0.13
SF1-201ENST00000227503 ARAP2Q8WZ64 1704 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 SLIT2O94813 1529 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 FAM205CA6NFA0 338 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 ERVV-1B6SEH8 477 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 PES1O00541 588 aaKnown RBP15.83■□□□□ 0.12
SF1-201ENST00000227503 ACTN3Q08043 901 aaPredicted RBP15.83■□□□□ 0.12
SF1-201ENST00000227503 NOSTRINQ8IVI9 506 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 ZNF34Q8IZ26 560 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 NAA15Q9BXJ9 866 aaKnown RBP15.83■□□□□ 0.12
SF1-201ENST00000227503 CSRNP2Q9H175 543 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 VIPAS39Q9H9C1 493 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 FBXO2Q9UK22 296 aaPredicted RBP15.83■□□□□ 0.12
SF1-201ENST00000227503 DUSP10Q9Y6W6 482 aa15.83■□□□□ 0.12
SF1-201ENST00000227503 SHTN1A0MZ66 631 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 SNAP23O00161 211 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 EIF3HO15372 352 aaKnown RBP eCLIP15.82■□□□□ 0.126e-9■□□□□ 8.2
SF1-201ENST00000227503 ACTN4O43707 911 aaKnown RBP15.82■□□□□ 0.12
SF1-201ENST00000227503 AKNAD1Q5T1N1 836 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 ELOA2Q8IYF1 753 aaPredicted RBP15.82■□□□□ 0.12
SF1-201ENST00000227503 FAM107BQ9H098 131 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 NUP98P52948 1817 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 TIAM2Q8IVF5 1701 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 MYH10P35580 1976 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 FRMD3A2A2Y4 597 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 NDUFAB1O14561 156 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 MAP3K12Q12852 859 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 KCTD19Q17RG1 926 aaPredicted RBP15.82■□□□□ 0.12
SF1-201ENST00000227503 GBP6Q6ZN66 633 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 CNGA4Q8IV77 575 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 KIRREL3Q8IZU9 778 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 EEF2KMTQ96G04 330 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 BLZF1Q9H2G9 400 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 DACH1Q9UI36 760 aa15.82■□□□□ 0.12
SF1-201ENST00000227503 PRKAB2O43741 272 aa15.81■□□□□ 0.12
SF1-201ENST00000227503 MMP1P03956 469 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms