RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 HSPA4P34932 840 aa16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 GCLCP48506 637 aaPredicted RBP16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 KCNB2Q92953 911 aa16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 BTBD7Q9P203 1132 aa16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 ZSWIM8A7E2V4 1837 aa16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 DSG3P32926 999 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 LACTBP83111 547 aaPredicted RBP16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 TSGA10IPQ3SY00 556 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 RNF20Q5VTR2 975 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 HOXC10Q9NYD6 342 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 MORF4L1Q9UBU8 362 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 BMP3P12645 472 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 NT5C2P49902 561 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 IGDCC4Q8TDY8 1250 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 GMCL1Q96IK5 515 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 ADAMTS5Q9UNA0 930 aa16.93■□□□□ 0.3
SUPT4H1-201ENST00000225504 TMEM232C9JQI7 657 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 PRC1O43663 620 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 SLC1A4P43007 532 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 PSMC4P43686 418 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 FAM110CQ1W6H9 321 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 TTBK2Q6IQ55 1244 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 LBX2Q6XYB7 198 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 GPRC5AQ8NFJ5 357 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 ERO1AQ96HE7 468 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 TRIM47Q96LD4 638 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 NEK1Q96PY6 1258 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 RABGAP1Q9Y3P9 1069 aa16.92■□□□□ 0.3
SUPT4H1-201ENST00000225504 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 CPA1P15085 419 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 C8orf34Q49A92 452 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 PNMA1Q8ND90 353 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 TCEANC2Q96MN5 208 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 LRRC2Q9BYS8 371 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 KAT14Q9H8E8 782 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 GPCPD1Q9NPB8 672 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 PPP1R9AQ9ULJ8 1098 aa16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
SUPT4H1-201ENST00000225504 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 GOLGA8HP0CJ92 632 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 PDHBP11177 359 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 ZKSCAN1P17029 563 aaPredicted RBP16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 MCM5P33992 734 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 SLC16A2P36021 539 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 ERVK-9P63128 1117 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 ERVK-24P63145 666 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 TMEM67Q5HYA8 995 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 OTOP1Q7RTM1 612 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 DCAF4Q8WV16 495 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 SLF1Q9BQI6 1058 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 PORCNQ9H237 461 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
SUPT4H1-201ENST00000225504 VWA5AO00534 786 aa16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 FMNL1O95466 1100 aaPredicted RBP16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 SNHG28P0DPA3 235 aa16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 SNAP25P60880 206 aa16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 EXOSC10Q01780 885 aaKnown RBP16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 TMEM132BQ14DG7 1078 aa16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 CCDC96Q2M329 555 aa16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 CTU1Q7Z7A3 348 aaKnown RBP16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 PRPF38AQ8NAV1 312 aaKnown RBP16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 EFCC1Q9HA90 598 aa16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 MYPNQ86TC9 1320 aa16.89■□□□□ 0.29
SUPT4H1-201ENST00000225504 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 ZNF543Q08ER8 600 aa16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 KIF22Q14807 665 aa16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 WTAPQ15007 396 aa16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 REPS2Q8NFH8 660 aa16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 JAKMIP1Q96N16 626 aaKnown RBP16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 CPVLQ9H3G5 476 aa16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
SUPT4H1-201ENST00000225504 KRT32Q14532 448 aa16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 DHX32Q7L7V1 743 aaKnown RBP16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 GTF3C2Q8WUA4 911 aaPredicted RBP16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 CHURC1Q8WUH1 139 aa16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 MOV10L1Q9BXT6 1211 aaKnown RBP16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 GABRQQ9UN88 632 aa16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 DOCK3Q8IZD9 2030 aa16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 MGAMO43451 1857 aa16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
SUPT4H1-201ENST00000225504 ERICH2A1L162 156 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 SH2B2O14492 632 aaPredicted RBP16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 STAT2P52630 851 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 FCGRTP55899 365 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 IKQ13123 557 aaPredicted RBP16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 PLS1Q14651 629 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 TMEM87BQ96K49 555 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms