RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 RPGRQ92834 1020 aaKnown RBP18.01■□□□□ 0.47
SF3A2-201ENST00000221494 NAPGQ99747 312 aaPredicted RBP18.01■□□□□ 0.47
SF3A2-201ENST00000221494 EPC1Q9H2F5 836 aa18.01■□□□□ 0.47
SF3A2-201ENST00000221494 AATFQ9NY61 560 aaKnown RBP eCLIP18.01■□□□□ 0.47
SF3A2-201ENST00000221494 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
SF3A2-201ENST00000221494 CTAGE15A4D2H0 777 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 MMP10P09238 476 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 CTAGE8P0CG41 777 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
SF3A2-201ENST00000221494 PPP2R5BQ15173 497 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 HSP90B2PQ58FF3 399 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 RAD9BQ6WBX8 426 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 CTAGE6Q86UF2 777 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 CTAGE4Q8IX94 777 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
SF3A2-201ENST00000221494 GSDMAQ96QA5 445 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 DESI2Q9BSY9 194 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 KRT23Q9C075 422 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 PIH1D3Q9NQM4 214 aaKnown RBP18■□□□□ 0.47
SF3A2-201ENST00000221494 SLC12A7Q9Y666 1083 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 ZNF804BA4D1E1 1349 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 SYNRGQ9UMZ2 1314 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 CASZ1Q86V15 1759 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 SOWAHDA6NJG2 315 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 DEXIO95424 95 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 TAF1P21675 1872 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 TOB1P50616 345 aaPredicted RBP18■□□□□ 0.47
SF3A2-201ENST00000221494 SPAG1Q07617 926 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 CUL4BQ13620 913 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 KIF4BQ2VIQ3 1234 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 TMEM67Q5HYA8 995 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 NFXL1Q6ZNB6 911 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 SH3RF1Q7Z6J0 888 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 DEFB132Q7Z7B7 95 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 MICU3Q86XE3 530 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 TMTC2Q8N394 836 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 PHKBQ93100 1093 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 PYM1Q9BRP8 204 aaKnown RBP18■□□□□ 0.47
SF3A2-201ENST00000221494 BRIP1Q9BX63 1249 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 TRIM34Q9BYJ4 488 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 STK32BQ9NY57 414 aa18■□□□□ 0.47
SF3A2-201ENST00000221494 RRP15Q9Y3B9 282 aaKnown RBP18■□□□□ 0.47
SF3A2-201ENST00000221494 BAG6P46379 1132 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 GYG1P46976 350 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 SF3B2Q13435 895 aaKnown RBP17.99■□□□□ 0.47
SF3A2-201ENST00000221494 SLC51AQ86UW1 340 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 RAB11FIP4Q86YS3 637 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 DIS3L2Q8IYB7 885 aaKnown RBP17.99■□□□□ 0.47
SF3A2-201ENST00000221494 FAM84BQ96KN1 310 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-201ENST00000221494 PDE11AQ9HCR9 933 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 SAMSN1Q9NSI8 373 aaKnown RBP17.99■□□□□ 0.47
SF3A2-201ENST00000221494 FOXN1O15353 648 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 PRR29P0C7W0 189 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 RBL2Q08999 1139 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 SLC9C2Q5TAH2 1124 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 MSL1Q68DK7 614 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 RBM17Q96I25 401 aaKnown RBP17.99■□□□□ 0.47
SF3A2-201ENST00000221494 MED15Q96RN5 788 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 VPS18Q9P253 973 aa17.99■□□□□ 0.47
SF3A2-201ENST00000221494 MYH8P13535 1937 aa17.98■□□□□ 0.47
SF3A2-201ENST00000221494 AARSP49588 968 aaKnown RBP eCLIP17.98■□□□□ 0.472e-7■■■□□ 17.5
SF3A2-201ENST00000221494 MAP9Q49MG5 647 aa17.98■□□□□ 0.47
SF3A2-201ENST00000221494 ZNF569Q5MCW4 686 aa17.98■□□□□ 0.47
SF3A2-201ENST00000221494 FBXO33Q7Z6M2 555 aa17.98■□□□□ 0.47
SF3A2-201ENST00000221494 RPGRIP1Q96KN7 1286 aa17.98■□□□□ 0.47
SF3A2-201ENST00000221494 LRRC10BA6NIK2 292 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 B4E1Z4 1266 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 KLRK1P26718 216 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 CASP8Q14790 479 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 ZNF662Q6ZS27 426 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 FERMT2Q96AC1 680 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 CRAMP1Q96RY5 1269 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 LZTFL1Q9NQ48 299 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 LIMA1Q9UHB6 759 aaKnown RBP17.97■□□□□ 0.47
SF3A2-201ENST00000221494 BBOX1O75936 387 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 MTF1Q14872 753 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
SF3A2-201ENST00000221494 CAVIN4Q5BKX8 364 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 CYP26C1Q6V0L0 522 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 TRMT44Q8IYL2 757 aaKnown RBP17.97■□□□□ 0.47
SF3A2-201ENST00000221494 PNKPQ96T60 521 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 ABCB6Q9NP58 842 aa17.97■□□□□ 0.47
SF3A2-201ENST00000221494 BTBD18B2RXH4 712 aa17.96■□□□□ 0.47
SF3A2-201ENST00000221494 MAGEA9P43362 315 aa17.96■□□□□ 0.47
SF3A2-201ENST00000221494 TNNT3P45378 269 aaPredicted RBP17.96■□□□□ 0.47
SF3A2-201ENST00000221494 RTN1Q16799 776 aa17.96■□□□□ 0.47
SF3A2-201ENST00000221494 FAM107BQ9H098 131 aa17.96■□□□□ 0.47
SF3A2-201ENST00000221494 GNL3LQ9NVN8 582 aaKnown RBP17.96■□□□□ 0.47
SF3A2-201ENST00000221494 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.47
SF3A2-201ENST00000221494 MYH2Q9UKX2 1941 aa17.96■□□□□ 0.47
SF3A2-201ENST00000221494 MYH13Q9UKX3 1938 aa17.95■□□□□ 0.46
SF3A2-201ENST00000221494 TARSL2A2RTX5 802 aaKnown RBP17.95■□□□□ 0.46
SF3A2-201ENST00000221494 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
SF3A2-201ENST00000221494 CLSTN1O94985 981 aa17.95■□□□□ 0.46
SF3A2-201ENST00000221494 MCM6Q14566 821 aa17.95■□□□□ 0.46
SF3A2-201ENST00000221494 ANKRD20A12PQ8NF67 263 aa17.95■□□□□ 0.46
SF3A2-201ENST00000221494 STRBPQ96SI9 672 aaKnown RBP17.95■□□□□ 0.46
SF3A2-201ENST00000221494 PUF60Q9UHX1 559 aaKnown RBP17.95■□□□□ 0.46
SF3A2-201ENST00000221494 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms