RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 MCM6Q14566 821 aa17.96■□□□□ 0.47
SNAPC1-201ENST00000216294 SEC23AQ15436 765 aa17.96■□□□□ 0.47
SNAPC1-201ENST00000216294 PPFIBP1Q86W92 1011 aa17.96■□□□□ 0.47
SNAPC1-201ENST00000216294 MTRQ99707 1265 aa17.96■□□□□ 0.47
SNAPC1-201ENST00000216294 HINFPQ9BQA5 517 aa17.96■□□□□ 0.47
SNAPC1-201ENST00000216294 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
SNAPC1-201ENST00000216294 SBF2Q86WG5 1849 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 N4BP1O75113 896 aaKnown RBP17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 CCDC175P0C221 793 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 IL17AQ16552 155 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 RASGRP4Q8TDF6 673 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 ADD3Q9UEY8 706 aaKnown RBP17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 DOCK2Q92608 1830 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 PIK3AP1Q6ZUJ8 805 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 SLC35F6Q8N357 371 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 ZNF384Q8TF68 577 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 GDAQ9Y2T3 454 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 TAF1LQ8IZX4 1826 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 XDHP47989 1333 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 ERVK-24P63145 666 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 SPATA20Q8TB22 786 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 FAM84BQ96KN1 310 aaPredicted RBP17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 FUT8Q9BYC5 575 aa17.95■□□□□ 0.46
SNAPC1-201ENST00000216294 TRIM49BA6NDI0 452 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 CYP2D6P10635 497 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 KRT2P35908 639 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 NFIXQ14938 502 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 LONRF2Q1L5Z9 754 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 SPATA1Q5VX52 437 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 RRAGBQ5VZM2 374 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 SLF1Q9BQI6 1058 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 A0A1B0GUL6 1792 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 PP2D1A8MPX8 630 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 PES1O00541 588 aaKnown RBP17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 FUT2Q10981 343 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 NPY5RQ15761 445 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 KIF4BQ2VIQ3 1234 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 CHP1Q99653 195 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 PHF20Q9BVI0 1012 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 SRRTQ9BXP5 876 aaKnown RBP17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 ANKZF1Q9H8Y5 726 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 TFCP2L1Q9NZI6 479 aa17.94■□□□□ 0.46
SNAPC1-201ENST00000216294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 MAGEB6P1A0A0J9YX57 407 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 CHMP4BP1P59074 171 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 GPR161Q8N6U8 529 aaKnown RBP17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 ZSCAN10Q96SZ4 725 aaPredicted RBP17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 ARFGAP3Q9NP61 516 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 DACH1Q9UI36 760 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 ENC1O14682 589 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 MFAP3LO75121 409 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 TM4SF1P30408 202 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 KRT31Q15323 416 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 GOLGA1Q92805 767 aa17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 GNL3LQ9NVN8 582 aaKnown RBP17.93■□□□□ 0.46
SNAPC1-201ENST00000216294 PHACTR2O75167 634 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 NCAPH2Q6IBW4 605 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 ZNF579Q8NAF0 562 aaKnown RBP17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 GPKOWQ92917 476 aaPredicted RBP eCLIP17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 AATFQ9NY61 560 aaKnown RBP eCLIP17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 TNRC6CQ9HCJ0 1690 aaKnown RBP17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 USP17L12C9JPN9 530 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 USP17L21D6R901 530 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 N4BP3O15049 544 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 TTC38Q5R3I4 469 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 ESR2Q92731 530 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 PDE11AQ9HCR9 933 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 HDAC6Q9UBN7 1215 aa17.92■□□□□ 0.46
SNAPC1-201ENST00000216294 TUBB4AP04350 444 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 PBX1P40424 430 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 CDKAL1Q5VV42 579 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 SH3RF1Q7Z6J0 888 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 NUP88Q99567 741 aaPredicted RBP17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 CEP131Q9UPN4 1083 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 TXLNAP40222 546 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 IRX5P78411 483 aaPredicted RBP17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 DHX8Q14562 1220 aaKnown RBP17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 RASGRP2Q7LDG7 609 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 NOA1Q8NC60 698 aaKnown RBP17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 GDAP1L1Q96MZ0 367 aa17.91■□□□□ 0.46
SNAPC1-201ENST00000216294 TRIM37O94972 964 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 TROAPQ12815 778 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 RNF26Q9BY78 433 aaPredicted RBP17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 NKRFO15226 690 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 PMS1P54277 932 aaKnown RBP17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 CNBD1Q8NA66 436 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 RABGGTAQ92696 567 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 PANX2Q96RD6 677 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 ABCB6Q9NP58 842 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 PNPLA7Q6ZV29 1317 aa17.9■□□□□ 0.46
SNAPC1-201ENST00000216294 KIF5CO60282 957 aa17.89■□□□□ 0.45
SNAPC1-201ENST00000216294 SRGAP2O75044 1071 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms