RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 ATP2C1P98194 919 aaPredicted RBP9.37□□□□□ -0.91
CDC27-201ENST00000066544 MCM6Q14566 821 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 FCHSD1Q86WN1 690 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 SPATA20Q8TB22 786 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 UIMC1Q96RL1 719 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 MFAP3LO75121 409 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 SASH3O75995 380 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 PIP4K2BP78356 416 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 UBXN1Q04323 297 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 GRIK5Q16478 980 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 TMEM60Q9H2L4 133 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 TRIM10Q9UDY6 481 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 KIF20AO95235 890 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 CALM1P0DP23 149 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 CALM2P0DP24 149 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 CALM3P0DP25 149 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 CHP1Q99653 195 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 SRRTQ9BXP5 876 aaKnown RBP9.36□□□□□ -0.91
CDC27-201ENST00000066544 GUCA1BQ9UMX6 200 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 MRFAP1Q9Y605 127 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 GOLGA6L9A6NEM1 432 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 UBA7P41226 1012 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 PAK1Q13153 545 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 SH3RF1Q7Z6J0 888 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 PCMTD1Q96MG8 357 aaPredicted RBP9.36□□□□□ -0.91
CDC27-201ENST00000066544 KCNJ18B7U540 433 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 GNPATO15228 680 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 MYO1BO43795 1136 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 TUBB4AP04350 444 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 TXLNAP40222 546 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 PRCPP42785 496 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 COPB1P53618 953 aaKnown RBP9.36□□□□□ -0.91
CDC27-201ENST00000066544 KCNJ12Q14500 433 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 RCSD1Q6JBY9 416 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 TNFRSF25Q93038 417 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 HINFPQ9BQA5 517 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 WWC2Q6AWC2 1192 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 BLIDQ8IZY5 108 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 SUGCTQ9HAC7 445 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 DISP2A7MBM2 1401 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 RPN1P04843 607 aaKnown RBP9.36□□□□□ -0.91
CDC27-201ENST00000066544 CDKAL1Q5VV42 579 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 ANKRD20A12PQ8NF67 263 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 ARFGAP3Q9NP61 516 aa9.36□□□□□ -0.91
CDC27-201ENST00000066544 ENC1O14682 589 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 DDAH1O94760 285 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 PPP2R5BQ15173 497 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 NEK11Q8NG66 645 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDC27-201ENST00000066544 XIRP1Q702N8 1843 aaKnown RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 BMP15O95972 392 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 ERVK-24P63145 666 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 CC2D1AQ6P1N0 951 aaPredicted RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 FBXO33Q7Z6M2 555 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 SH3RF3Q8TEJ3 882 aaPredicted RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 GOLGA1Q92805 767 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 TRIM47Q96LD4 638 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 TSPY3P0CV98 308 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 TSPY8P0CW00 308 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 SF3B3Q15393 1217 aaKnown RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 LETM2Q2VYF4 491 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 MTA3Q9BTC8 594 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 SPATA31A1Q5TZJ5 1347 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 OAS2P29728 719 aaKnown RBP9.35□□□□□ -0.91
CDC27-201ENST00000066544 KIF5BP33176 963 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 CCDC178Q5BJE1 867 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 DTHD1Q6ZMT9 781 aa9.35□□□□□ -0.91
CDC27-201ENST00000066544 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.34□□□□□ -0.91
CDC27-201ENST00000066544 GOLGB1Q14789 3259 aaKnown RBP9.34□□□□□ -0.91
CDC27-201ENST00000066544 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
CDC27-201ENST00000066544 ZPR1O75312 459 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 RCAN1P53805 252 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 E2F4Q16254 413 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 CNGA4Q8IV77 575 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 PANX2Q96RD6 677 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 CTAGE1Q96RT6 745 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 IL17RBQ9NRM6 502 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 CHD4Q14839 1912 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 ECM29Q5VYK3 1845 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 ZRANB2O95218 330 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDC27-201ENST00000066544 TBC1D8O95759 1140 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 ZNF444Q8N0Y2 327 aaPredicted RBP9.34□□□□□ -0.91
CDC27-201ENST00000066544 MYH6P13533 1939 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 ZFP91Q96JP5 570 aaPredicted RBP9.34□□□□□ -0.91
CDC27-201ENST00000066544 NID2Q14112 1375 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 NFIXQ14938 502 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 ELOA2Q8IYF1 753 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms