RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 RIMBP2O15034 1052 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 SARSP49591 514 aaKnown RBP14.91□□□□□ -0.02
CTNS-201ENST00000046640 KARSQ15046 597 aaKnown RBP14.91□□□□□ -0.02
CTNS-201ENST00000046640 WDR66Q8TBY9 1149 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 CPLX3Q8WVH0 158 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 L2HGDHQ9H9P8 463 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 C6orf229H3BNL8 230 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 BTDP43251 543 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 GNG11P61952 73 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 PFKFB3Q16875 520 aaPredicted RBP14.91□□□□□ -0.02
CTNS-201ENST00000046640 ZNF804AQ7Z570 1209 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 NOL10Q9BSC4 688 aaKnown RBP14.91□□□□□ -0.02
CTNS-201ENST00000046640 XDHP47989 1333 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 IRS2Q9Y4H2 1338 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 CBFA2T2O43439 604 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 SBK1Q52WX2 424 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 VSTM4Q8IW00 320 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 BBXQ8WY36 941 aaPredicted RBP14.9□□□□□ -0.02
CTNS-201ENST00000046640 GJD4Q96KN9 370 aaPredicted RBP14.9□□□□□ -0.02
CTNS-201ENST00000046640 PP2D1A8MPX8 630 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 BAG3O95817 575 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
CTNS-201ENST00000046640 BMS1Q14692 1282 aaKnown RBP14.9□□□□□ -0.02
CTNS-201ENST00000046640 SLC35G1Q2M3R5 365 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 TEX35Q5T0J7 233 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 TRIM65Q6PJ69 517 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 SEPT12Q8IYM1 358 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 MLKLQ8NB16 471 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 CD209Q9NNX6 404 aa14.9□□□□□ -0.02
CTNS-201ENST00000046640 MKRN1Q9UHC7 482 aaKnown RBP14.9□□□□□ -0.02
CTNS-201ENST00000046640 SCN7AQ01118 1682 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 SERPINB2P05120 415 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 KIF5BP33176 963 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 WDR24Q96S15 920 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 LEMD3Q9Y2U8 911 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 FHOD1Q9Y613 1164 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 BTAF1O14981 1849 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 TEX33O43247 280 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 CYTH3O43739 400 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 H2AFXP16104 143 aaPredicted RBP14.89□□□□□ -0.03
CTNS-201ENST00000046640 TOGARAM2Q6ZUX3 1019 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 REXO1L1PQ8IX06 675 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 RASSF8Q8NHQ8 419 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 CCDC34Q96HJ3 373 aa14.89□□□□□ -0.03
CTNS-201ENST00000046640 IRX2Q9BZI1 471 aaPredicted RBP14.89□□□□□ -0.03
CTNS-201ENST00000046640 ZCCHC17Q9NP64 241 aaKnown RBP14.89□□□□□ -0.03
CTNS-201ENST00000046640 PNMA6AP0CW24 399 aaPredicted RBP14.88□□□□□ -0.03
CTNS-201ENST00000046640 EIF6P56537 245 aaKnown RBP14.88□□□□□ -0.03
CTNS-201ENST00000046640 PICALMQ13492 652 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 INF2Q27J81 1249 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 MFSD14BQ5SR56 506 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 NT5DC1Q5TFE4 455 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 TMCO3Q6UWJ1 677 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 AMOTL1Q8IY63 956 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 TEX11Q8IYF3 940 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 BLIDQ8IZY5 108 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 TMEM47Q9BQJ4 181 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 PPP2R2CQ9Y2T4 447 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 A0A1B0GUL6 1792 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 GYS1P13807 737 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 ATP2C1P98194 919 aaPredicted RBP14.88□□□□□ -0.03
CTNS-201ENST00000046640 CUL4BQ13620 913 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 MTF1Q14872 753 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 KANK3Q6NY19 840 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 USP17L2Q6R6M4 530 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 FERMT2Q96AC1 680 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 POLLQ9UGP5 575 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 MAD2L2Q9UI95 211 aa14.88□□□□□ -0.03
CTNS-201ENST00000046640 TNRC6CQ9HCJ0 1690 aaKnown RBP14.88□□□□□ -0.03
CTNS-201ENST00000046640 DPYDQ12882 1025 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 ENOX1Q8TC92 643 aaKnown RBP14.87□□□□□ -0.03
CTNS-201ENST00000046640 BAG1Q99933 345 aaPredicted RBP14.87□□□□□ -0.03
CTNS-201ENST00000046640 CASQ1P31415 396 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 CLEC10AQ8IUN9 316 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 MTRQ99707 1265 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 MXD3Q9BW11 206 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 RTFDC1Q9BY42 306 aaPredicted RBP14.87□□□□□ -0.03
CTNS-201ENST00000046640 KCND1Q9NSA2 647 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 GGA1Q9UJY5 639 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 CCDC194A0A1B0GVG4 234 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 SLURP2P0DP57 97 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 ZNF18P17022 549 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 RASA1P20936 1047 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 PLA2G4AP47712 749 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 DGKHQ86XP1 1220 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 UBA5Q9GZZ9 404 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 DACH1Q9UI36 760 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 CTNND2Q9UQB3 1225 aa14.87□□□□□ -0.03
CTNS-201ENST00000046640 AFF2P51816 1311 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 PDS5AQ29RF7 1337 aaKnown RBP14.86□□□□□ -0.03
CTNS-201ENST00000046640 A0A0U1RQJ8 604 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 TRIM37O94972 964 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 CCT6AP40227 531 aaKnown RBP14.86□□□□□ -0.03
CTNS-201ENST00000046640 GTF2IP78347 998 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 ATRIPQ8WXE1 791 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 EEF2KMTQ96G04 330 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 EYA3Q99504 573 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms