RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PCDHA5Q9Y5H7 936 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 PHLPP1O60346 1717 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 YEATS4O95619 227 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 ATP1A3P13637 1013 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 RILPL1Q5EBL4 403 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 RHOXF2BP0C7M4 288 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 RHOXF2Q9BQY4 288 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 COA1Q9GZY4 146 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 EXOC1Q9NV70 894 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 TAB2Q9NYJ8 693 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 PAXBP1Q9Y5B6 917 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 ZMYM6O95789 1325 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
CHPF2-201ENST00000035307 DDX39AO00148 427 aaKnown RBP13.61□□□□□ -0.23
CHPF2-201ENST00000035307 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
CHPF2-201ENST00000035307 SLU7O95391 586 aaKnown RBP13.61□□□□□ -0.23
CHPF2-201ENST00000035307 SRGNP10124 158 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 UBXN1Q04323 297 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 SPA17Q15506 151 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 TTC38Q5R3I4 469 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 LY9Q9HBG7 655 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 PIM2Q9P1W9 311 aa13.61□□□□□ -0.23
CHPF2-201ENST00000035307 DISP2A7MBM2 1401 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 CEP95Q96GE4 821 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 AKR1B10O60218 316 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 ICA1Q05084 483 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 NAA30Q147X3 362 aaPredicted RBP13.6□□□□□ -0.23
CHPF2-201ENST00000035307 ZNF569Q5MCW4 686 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 DTHD1Q6ZMT9 781 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 NOSTRINQ8IVI9 506 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 PIGSQ96S52 555 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 FZD1Q9UP38 647 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 GH2P01242 217 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 POSTNQ15063 836 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 KANK3Q6NY19 840 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 SP8Q8IXZ3 490 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 SMARCC2Q8TAQ2 1214 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHPF2-201ENST00000035307 PSMB7Q99436 277 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 BAG1Q99933 345 aaPredicted RBP13.6□□□□□ -0.23
CHPF2-201ENST00000035307 CARD6Q9BX69 1037 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 POLD4Q9HCU8 107 aa13.6□□□□□ -0.23
CHPF2-201ENST00000035307 CGNQ9P2M7 1197 aaKnown RBP13.6□□□□□ -0.23
CHPF2-201ENST00000035307 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 AKR1B1P15121 316 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 SEPT2Q15019 361 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 DYMQ7RTS9 669 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 IGSF22Q8N9C0 903 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 TBC1D7Q9P0N9 293 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 USP17L5A8MUK1 530 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 TMEM232C9JQI7 657 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 NSMFQ6X4W1 530 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 ZNF500O60304 480 aaPredicted RBP13.59□□□□□ -0.23
CHPF2-201ENST00000035307 USP8P40818 1118 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 NLRP12P59046 1061 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 MYRIPQ8NFW9 859 aa13.59□□□□□ -0.23
CHPF2-201ENST00000035307 RPAP1Q9BWH6 1393 aaPredicted RBP13.59□□□□□ -0.23
CHPF2-201ENST00000035307 SEMA3EO15041 775 aa13.58□□□□□ -0.23
CHPF2-201ENST00000035307 LINC00301Q8NCQ3 95 aa13.58□□□□□ -0.23
CHPF2-201ENST00000035307 PLEKHA4Q9H4M7 779 aa13.58□□□□□ -0.23
CHPF2-201ENST00000035307 GNAQP50148 359 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 KIF23Q02241 960 aaPredicted RBP13.58□□□□□ -0.24
CHPF2-201ENST00000035307 SAMD7Q7Z3H4 446 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 ZNF215Q9UL58 517 aaPredicted RBP13.58□□□□□ -0.24
CHPF2-201ENST00000035307 CUTAO60888 179 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 EXOSC10Q01780 885 aaKnown RBP13.58□□□□□ -0.24
CHPF2-201ENST00000035307 SLC10A5Q5PT55 438 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 ZNF397Q8NF99 534 aaPredicted RBP13.58□□□□□ -0.24
CHPF2-201ENST00000035307 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.24
CHPF2-201ENST00000035307 MROH7-TTC4A0A0A0MT08 1334 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 TAL1P17542 331 aaPredicted RBP13.57□□□□□ -0.24
CHPF2-201ENST00000035307 UBE2SQ16763 222 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 ABCB5Q2M3G0 1257 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 CUL5Q93034 780 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.57□□□□□ -0.24
CHPF2-201ENST00000035307 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 PSMA7O14818 248 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 CTDNEP1O95476 244 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 DDIT3P35638 169 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 MRC1P22897 1456 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 ST3GAL1Q11201 340 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 TMEM132AQ24JP5 1023 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 SLFN13Q68D06 897 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 TDRD7Q8NHU6 1098 aaKnown RBP13.57□□□□□ -0.24
CHPF2-201ENST00000035307 GDAP1L1Q96MZ0 367 aa13.57□□□□□ -0.24
CHPF2-201ENST00000035307 RCOR1Q9UKL0 485 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms