RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Tfap4Q9JIZ5 338 aa27.85■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Krt85Q9Z2T6 507 aa27.85■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Yy1Q00899 414 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Fam89aQ14BJ1 175 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Lca5lQ8C0X0 741 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Gmcl1Q920G9 524 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Prg3Q9JL95 222 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Usp14Q9JMA1 493 aaKnown RBP27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Gm44503E9PYU5 387 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Lnx1O70263 728 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Mboat4P0C7A3 435 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 CebpaP53566 359 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Mtmr3Q8K296 1196 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Q8K2W9 541 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Dnaaf4Q8R368 420 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Rbm19Q8R3C6 952 aaKnown RBP27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Tm4sf4Q91XD3 202 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Rfc4Q99J62 364 aa27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Mettl16Q9CQG2 553 aaKnown RBP27.84■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Nfil3O08750 462 aa27.83■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Lilrb3P97484 841 aa27.83■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Tfcp2Q9ERA0 502 aa27.83■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Gm5114W4VSN8 858 aa27.83■■■□□ 2.05
Pcf11-205ENSMUST00000208255 Gm30191A0A0U1RNT7 187 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Serpinb2P12388 415 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Ube2hP62257 183 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Cplx1P63040 134 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Sfi1Q3UZY0 1216 aaKnown RBP27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Gja3Q64448 417 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Vps37dQ810I0 261 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Sec62Q8BU14 398 aaKnown RBP27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Kdm4aQ8BW72 1064 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Slc18a1Q8R090 521 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Inpp4aQ9EPW0 939 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Psmd10Q9Z2X2 231 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Thsd7bQ6P4U0 1607 aa27.82■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Copb2O55029 905 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Sap30bpQ02614 308 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Epha2Q03145 977 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Arl14Q3SXC5 192 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Otud5Q3U2S4 566 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Mars2Q499X9 586 aaKnown RBP27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Usp28Q5I043 1051 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Slc4a7Q8BTY2 1034 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Arrdc4A0A0B4J1F4 415 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Nap1l2P51860 460 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Kctd1Q5M956 257 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Cnksr2Q80YA9 1032 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Srek1Q8BZX4 494 aaKnown RBP27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Cd2apQ9JLQ0 637 aa27.81■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Mms22lB1AUR6 1238 aa27.8■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Vmn1r199Q8R280 367 aa27.8■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Defb15Q8R2I5 79 aa27.8■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Upf1Q9EPU0 1124 aaKnown RBP27.8■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Magea8O89012 320 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Gm28047Q3US59 414 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 PRAG1Q571I4 1179 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Clca4aQ6Q473 924 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Dnaaf2Q8BPI1 814 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Cog5Q8C0L8 829 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Bst2Q8R2Q8 172 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 NenfQ9CQ45 171 aa27.79■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Traf1P39428 409 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Stxbp3Q60770 592 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Pxylp1Q8BHA9 480 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Ndufb9Q9CQJ8 179 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 HunkO88866 714 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 SobpQ0P5V2 864 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Kmt5bQ3U8K7 883 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Galnt17Q7TT15 598 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Trnp1Q80ZI1 223 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Naa30Q8CES0 364 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Plcg2Q8CIH5 1265 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Glipr1l2Q9CQ35 332 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Clic4Q9QYB1 253 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 ArcQ9WV31 396 aa27.78■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Col11a1Q61245 1804 aa27.77■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Ttbk2Q3UVR3 1243 aa27.77■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Tmx3Q8BXZ1 456 aa27.77■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Nup88Q8CEC0 753 aaKnown RBP27.77■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Ulk4Q3V129 1303 aa27.77■■■□□ 2.04
Pcf11-205ENSMUST00000208255 Pus7B7ZNL8 666 aaKnown RBP27.76■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Atoh1P48985 351 aa27.76■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Cyp4x1Q6A152 507 aa27.76■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Col4a3bpQ9EQG9 624 aa27.76■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Pdcd6ipQ9WU78 869 aaKnown RBP27.76■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Armc3A2AU72 881 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Gm9992B2RWK3 458 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Rexo5D3YW29 759 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Oog1E9Q5G7 496 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Kcna1P16388 495 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Cbx2P30658 519 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Unc93aQ710D3 458 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Vgll2Q8BGW8 322 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Wdr24Q8CFJ9 790 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Ndufa8Q9DCJ5 172 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Ubxn8Q9QZ49 277 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Dnai2A2AC93 623 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Tfcp2l1Q3UNW5 479 aa27.75■■■□□ 2.03
Pcf11-205ENSMUST00000208255 Tcp11l1Q8BTG3 509 aa27.75■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms