RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Amhr2Q8K592 568 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Eif4enif1Q9EST3 983 aaKnown RBP12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Speer4dL7N216 212 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Lrrn2Q6PHP6 730 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ttc12Q8BW49 704 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Nod2Q8K3Z0 1020 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 AdarQ99MU3 1178 aaKnown RBP12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Gja10Q9WUS4 505 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Scn11aQ9R053 1765 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Arhgap4B1AUY3 965 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 1700029H14RikE9PY36 240 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Zbtb7aO88939 569 aaKnown RBP12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Rad23bP54728 416 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tacc1Q6Y685 774 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Slc39a11Q8BWY7 342 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Rbm28Q8CGC6 750 aaKnown RBP12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ubac1Q8VDI7 409 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Sgpp1Q9JI99 430 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Plch1Q4KWH5 1682 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ugt1a8D3Z748 530 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ugt1a10E9PXN7 530 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Pak1O88643 545 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ranbp1P34022 203 aaKnown RBP12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ppp2r5bQ6PD28 497 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Olfm5Q8BU90 496 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ano2Q8CFW1 1002 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Vmn1r218Q8R261 298 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Prpf3Q922U1 683 aaKnown RBP12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Apobec3Q99J72 440 aaKnown RBP12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ndufb9Q9CQJ8 179 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tmem39aQ9CYC3 486 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Calml3Q9D6P8 149 aa12.72□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tcp11Q01755 566 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Top1Q04750 767 aaKnown RBP12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 DSCC1Q14AI0 399 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Pim2Q62070 370 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Dnph1Q80VJ3 173 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Prpf40bQ80W14 870 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 MtrrQ8C1A3 696 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 RarsQ9D0I9 660 aaKnown RBP12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Foxn2E9Q7L6 429 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tmem232Q5K6N0 675 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Arid3aQ62431 601 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Kif1bpQ6ZPU9 617 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 NelfbQ8C4Y3 580 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Bap1Q99PU7 728 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Mis18aQ9CZJ6 204 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 Hsd3b7Q9EQC1 369 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 AmfrQ9R049 643 aa12.71□□□□□ -0.37
Lig1-211ENSMUST00000177588 A0A1Y7VML8 143 aa12.71□□□□□ -0.38
Lig1-211ENSMUST00000177588 Psmd14O35593 310 aa12.71□□□□□ -0.38
Lig1-211ENSMUST00000177588 Znf496Q5SXI5 585 aa12.71□□□□□ -0.38
Lig1-211ENSMUST00000177588 Hdac4Q6NZM9 1076 aa12.71□□□□□ -0.38
Lig1-211ENSMUST00000177588 Ufl1Q8CCJ3 793 aaKnown RBP12.71□□□□□ -0.38
Lig1-211ENSMUST00000177588 Ccdc83Q9D4V3 305 aa12.71□□□□□ -0.38
Lig1-211ENSMUST00000177588 A0A0U1RNP2 1173 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Abcd1P48410 736 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Gjb4Q02738 266 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 IntuQ059U7 942 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Vipas39Q8BGQ1 491 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Setdb2Q8C267 713 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Znf609Q8BZ47 1413 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Ube4aE9Q735 1028 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Lrrc4bP0C192 709 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Kifap3P70188 793 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Spata4Q8K3V1 295 aa12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Rbm5Q91YE7 815 aaKnown RBP12.7□□□□□ -0.38
Lig1-211ENSMUST00000177588 Cyp26c1B2RXA7 518 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Rsph10bE9PYQ0 876 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Dnajc21E9Q8D0 531 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Gm21969J3QJZ1 289 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Kifc2O08672 792 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Slurp2P0DP59 97 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Siah1aP61092 282 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 PcQ05920 1178 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Rnf40Q3U319 1001 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Exoc8Q6PGF7 716 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Pabpc4Q6PHQ9 660 aaKnown RBP12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Dusp9Q7TNL7 452 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Dbndd2Q9CRD4 158 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Scrn1Q9CZC8 414 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Casp1P29452 402 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Vars2Q3U2A8 1060 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Igbp1Q61249 340 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Pus7lQ8CE46 702 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Prpf6Q91YR7 941 aaKnown RBP12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Tpcn1Q9EQJ0 817 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Gm7347D3YYI9 267 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Speer4aF8VPX6 267 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 GabrdP22933 449 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Dnm2P39054 870 aaKnown RBP12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Spata5Q3UMC0 893 aaKnown RBP12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Cnga2Q62398 664 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Irak1Q62406 710 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Cyp24a1Q64441 514 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Olfr118Q7TRJ6 321 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Ccdc14Q8K2J4 934 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Washc1Q8VDD8 475 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Srgap2Q91Z67 1071 aa12.69□□□□□ -0.38
Lig1-211ENSMUST00000177588 Sf3b3Q921M3 1217 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms