RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Actn4P57780 912 aaKnown RBP9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 4930567H17RikQ3V0K5 233 aa9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 Recql4Q75NR7 1216 aaKnown RBP9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 Pramel7Q810Y8 479 aa9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 Serpinb13Q8CDC0 389 aa9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 RnpepQ8VCT3 650 aaKnown RBP9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 Tomm22Q9CPQ3 142 aa9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 TrioQ0KL02 3102 aa9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 Myh7bA2AQP0 1941 aa9.67□□□□□ -0.86
Trim40-203ENSMUST00000172711 Atg4a-psA0A0G2JFS9 396 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Adam15O88839 864 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 AcrP23578 436 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Csrnp3P59055 597 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Znf667Q2TL60 609 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Palb2Q3U0P1 1104 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ccdc33Q3ULW6 985 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Pls1Q3V0K9 630 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Trim27Q62158 513 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 C2cd5Q7TPS5 1016 aaKnown RBP9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Supt20hQ7TT00 530 aaKnown RBP9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Trim56Q80VI1 734 aaKnown RBP9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Stac3Q8BZ71 360 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Atg4aQ8C9S8 396 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ildr1Q8CBR1 537 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Adgrf4Q9D2L6 698 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Tbc1d4Q8BYJ6 1307 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Dock5B2RY04 1868 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ppp1r9aH3BJD6 1292 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 C1qbpO35658 278 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 NfkbieO54910 364 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Abl1P00520 1123 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Sept4P28661 478 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Cyp2c38P56655 490 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Stim2P83093 746 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ttll4Q80UG8 1193 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 GopcQ8BH60 463 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ift74Q8BKE9 600 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 EngaseQ8BX80 734 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Btbd7Q8CFE5 1130 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Slc4a8Q8JZR6 1089 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 OplahQ8K010 1288 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Lrrc56Q8K375 552 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 BaatQ91X34 420 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 FanclQ9CR14 375 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Efcc1Q9JJF6 558 aa9.66□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ano3A2AHL1 981 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Pcdhb9E9Q5G2 828 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ankrd65F6YK91 380 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ephb4P54761 987 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Hs1bp3Q3TC93 395 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Rasip1Q3U0S6 961 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Sfi1Q3UZY0 1216 aaKnown RBP9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Fam170aQ66LM6 333 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Otop3Q80UF9 577 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Lmbrd2Q8C561 694 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Lmcd1Q8VEE1 365 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Mcoln1Q99J21 580 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Rbm43Q99J64 343 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Pdzd3Q99MJ6 498 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Ftsj3Q9DBE9 838 aaKnown RBP9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 SerhlQ9EPB5 311 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Sh2b2Q9JID9 621 aa9.65□□□□□ -0.86
Trim40-203ENSMUST00000172711 Scn3aA2ASI5 1947 aa9.65□□□□□ -0.87
Trim40-203ENSMUST00000172711 Lamb2Q61292 1799 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 PatjQ63ZW7 1834 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Baz2bA2AUY4 2123 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Ccdc188F6WEU2 249 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 CrcpO35427 148 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Copb2O55029 905 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Usp53P15975 1069 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Slc4a3P16283 1227 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Ptpn22P29352 802 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Ptpn12P35831 775 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Pla2g5P97391 137 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 GabpaQ00422 454 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Tmem63bQ3TWI9 832 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Cdc14aQ6GQT0 603 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Phtf2Q8CB19 747 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Alas1Q8VC19 642 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Prb1Q91X93 504 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Ier5lQ99J55 406 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Mxra8Q9DBV4 442 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 Atp8b3Q6UQ17 1335 aa9.64□□□□□ -0.87
Trim40-203ENSMUST00000172711 1110002E22RikE0CYV9 1786 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 AU019823E9PUQ3 292 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 A430078G23RikE9Q7Y4 484 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Dnajb6O54946 365 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Stat3P42227 770 aaKnown RBP9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Dpf3P58269 378 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Hps5P59438 1126 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Eya3P97480 510 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Gpc2Q8BKV1 579 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 PdgfcQ8CI19 345 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Ca9Q8VHB5 437 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Zmym2Q9CU65 1376 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Col5a3Q9JLI2 1739 aa9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Obsl1D3YYU8 1804 aaKnown RBP9.63□□□□□ -0.87
Trim40-203ENSMUST00000172711 Dnah12Q3V0Q1 3086 aa9.62□□□□□ -0.87
Trim40-203ENSMUST00000172711 Duxf3A0A0N4SV92 674 aa9.62□□□□□ -0.87
Trim40-203ENSMUST00000172711 A0A1W2P6Q8 802 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms