RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Ccdc33Q3ULW6 985 aa13.79□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Slc44a1Q6X893 653 aa13.79□□□□□ -0.2
Ebf3-203ENSMUST00000168203 VmacQ8BP01 174 aa13.79□□□□□ -0.2
Ebf3-203ENSMUST00000168203 SufuQ9Z0P7 484 aa13.79□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Akap11E9Q777 1895 aa13.79□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Col22a1E9Q7P1 1613 aa13.79□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Surf6P70279 355 aaKnown RBP13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Tmem109Q3UBX0 243 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Klhl7Q8BUL5 586 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Letm1Q9Z2I0 738 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Wdr44Q6NVE8 915 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Bcl2l12Q9D3J3 255 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Irs4Q9Z0Y7 1216 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 4931408C20RikE9PWP9 1381 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 ByslO54825 436 aaKnown RBP13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Clul1Q3ZRW6 464 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Cyp24a1Q64441 514 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Adcy2Q80TL1 1090 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Nod2Q8K3Z0 1020 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Ces1dQ8VCT4 565 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Spc24Q9D083 201 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 CpvlQ9D3S9 478 aa13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Telo2Q9DC40 840 aaKnown RBP13.78□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Pla2g4bP0C871 782 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Rad23bP54728 416 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Yipf3Q3UDR8 347 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Ccdc25Q78PG9 208 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 CgasQ8C6L5 507 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Ccdc14Q8K2J4 934 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Pold4Q9CWP8 107 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Sept12Q9D451 317 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Zranb2Q9R020 330 aaKnown RBP13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Trip6Q9Z1Y4 480 aa13.77□□□□□ -0.2
Ebf3-203ENSMUST00000168203 Fbf1A2A870 1173 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 ErmardE9Q048 622 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Gfpt1P47856 697 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Foxp1P58462 705 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Agbl1Q09M05 972 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Exoc1Q8R3S6 894 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 GzmnQ920S1 248 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Rps6ka4Q9Z2B9 773 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ankrd35E9Q9D8 996 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 HelqQ2VPA6 1069 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Epn1Q80VP1 575 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Rtn1Q8K0T0 780 aa13.77□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Sox5P35710 763 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tubb4bP68372 445 aaKnown RBP13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 SowahdQ8BY98 327 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Gm5580A0A0N4SVP8 411 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Palm3A2TJV2 734 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Fam186bD3Z420 943 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Naa15Q80UM3 865 aaKnown RBP13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Lrrc1Q80VQ1 524 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Mtmr6Q8VE11 617 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tulp1Q9Z273 543 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Sall1Q9ER74 1322 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Zfp853A0A1D5RM95 733 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ttc13A0A1L1SSC7 844 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tbc1d8bA3KGB4 1114 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 C2cd2E9Q3C1 696 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Stx8O88983 236 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Cd3dP04235 173 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Efcab14Q8BGQ6 484 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Cc2d1bQ8BRN9 848 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Mettl5Q8K1A0 209 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 HdlbpQ8VDJ3 1268 aaKnown RBP13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Coro7Q9D2V7 922 aa13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Knop1Q9Z2Q2 478 aaKnown RBP13.76□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Zbtb7aO88939 569 aaKnown RBP13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Sem1P60897 70 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 SfswapQ3USH5 945 aaKnown RBP13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tgs1Q923W1 853 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Capn15Q9JLG8 1095 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Dctpp1Q9QY93 170 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Gm10378F6XQQ1 160 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 NpcdF8VQB8 469 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Atp1b3P97370 278 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 MycbpapQ5SUV2 932 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Shisa4Q8CA71 197 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Nup133Q8R0G9 1155 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Luc7lQ9CYI4 371 aaKnown RBP13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Lonrf3Q9D4H7 753 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ccng2O08918 344 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Opa1P58281 960 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Gucy2cQ3UWA6 1072 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Serpinb1cQ5SV42 375 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Znf496Q5SXI5 585 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Iffo1Q8BXL9 562 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Usp33Q8R5K2 909 aa13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Rrp1bQ91YK2 724 aaKnown RBP13.75□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Clcn6O35454 870 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Hnrnph1O35737 449 aaKnown RBP13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tbc1d5Q80XQ2 815 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Hps6Q8BLY7 805 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 AdarQ99MU3 1178 aaKnown RBP13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Fam133bQ9CVI2 245 aaKnown RBP13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Dbndd1Q9CZ00 160 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Rcan1Q9JHG6 198 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 PappaQ8R4K8 1624 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Frmd7A2AD83 703 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms