RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Parp3Q3ULW8 533 aa10.98□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Glra4Q61603 456 aa10.98□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Phtf2Q8CB19 747 aa10.98□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Fez1Q8K0X8 392 aa10.98□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Vmn1r203Q8R273 311 aa10.98□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Szt2A2A9C3 3431 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Tcof1O08784 1320 aaKnown RBP10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Guca2bO09051 106 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 GlrbP48168 496 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Csrnp3P59055 597 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Hps5P59438 1126 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Stim2P83093 746 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Muc1Q02496 630 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Zbtb7bQ64321 544 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Trim56Q80VI1 734 aaKnown RBP10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Iws1Q8C1D8 766 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Lmbrd2Q8C561 694 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 DnerQ8JZM4 737 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 OplahQ8K010 1288 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Ppp2r2dQ925E7 453 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Akap8Q9DBR0 687 aaKnown RBP10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Tjp3Q9QXY1 905 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Dock2Q8C3J5 1828 aa10.97□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Dennd3A2RT67 1274 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 1700006A11RikB9EHI3 544 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Ccdc174Q3U155 467 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Cdc14aQ6GQT0 603 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Olfr118Q7TRJ6 321 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Gprasp2Q8BUY8 826 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Morc2bQ8C5W4 1022 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Nr3c2Q8VII8 978 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Mtmr4Q91XS1 1190 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Znf287Q9EQB9 759 aa10.96□□□□□ -0.65
Ssr3-202ENSMUST00000119896 Ripor3A1L3T7 938 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Copb2O55029 905 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Tph1P17532 447 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Shisa4Q8CA71 197 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Myt1Q8CFC2 1127 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Slc4a8Q8JZR6 1089 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Bst2Q8R2Q8 172 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Ca9Q8VHB5 437 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Ttll1Q91V51 423 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Mcoln1Q99J21 580 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Znf687Q9D2D7 1237 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Efcc1Q9JJF6 558 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Nlrc5C3VPR6 1915 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Myh7Q91Z83 1935 aa10.95□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Duxf3A0A0N4SV92 674 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Fyb2A2A995 729 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 A430078G23RikE9Q7Y4 484 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Usp53P15975 1069 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Traf1P39428 409 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Rasip1Q3U0S6 961 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Tshz1Q5DTH5 1084 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Skiv2lQ6NZR5 1244 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Hsdl1Q8BTX9 330 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Ttc12Q8BW49 704 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Rhot2Q8JZN7 620 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Nup133Q8R0G9 1155 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 DaglbQ91WC9 669 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Pdzd3Q99MJ6 498 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Tmx2Q9D710 295 aaKnown RBP10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Znf521Q6KAS7 1311 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Plxnb3Q9QY40 1902 aa10.94□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Trdmt1O55055 415 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Art2aP17981 287 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 NapbP28663 298 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Kcnh8P59111 1102 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Adgrg6Q6F3F9 1165 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Kiaa1328Q6NZK5 612 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 NfrkbQ6PIJ4 1296 aaKnown RBP10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Tacc1Q6Y685 774 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Otop3Q80UF9 577 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Fam109aQ8BH49 266 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Adnp2Q8CHC8 1165 aaKnown RBP10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Alas1Q8VC19 642 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Sppl3Q9CUS9 384 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Kdm8Q9CXT6 414 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Alg13Q9D8C3 1166 aaKnown RBP10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Tle2Q9WVB2 767 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Ptpn12P35831 775 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Ephb4P54761 987 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Eif5bQ05D44 1216 aaKnown RBP10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Atp13a3Q5XF89 1219 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Mybpc2Q5XKE0 1136 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Stxbp3Q60770 592 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Fam170aQ66LM6 333 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Prmt6Q6NZB1 378 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Ms4a5Q810P8 197 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 PdgfcQ8CI19 345 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Mrpl58Q8R035 206 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Cluap1Q8R3P7 413 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 AclyQ91V92 1091 aaKnown RBP10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Dis3Q9CSH3 958 aaKnown RBP10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Atp1a4Q9WV27 1032 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Zmym2Q9CU65 1376 aa10.93□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Ulk4Q3V129 1303 aa10.92□□□□□ -0.66
Ssr3-202ENSMUST00000119896 PfasQ5SUR0 1337 aa10.92□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Upf2A2AT37 1269 aaKnown RBP10.92□□□□□ -0.66
Ssr3-202ENSMUST00000119896 Zscan18E9PUD6 809 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms