RNA–Protein interactions for RNA: ENSMUST00000109468.2

Top1-201, Transcript of DNA topoisomerase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Top1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Top1-201ENSMUST00000109468 Cdan1Q8CC12 1239 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Dnajc17Q91WT4 303 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Tpcn1Q9EQJ0 817 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Tacc2Q9JJG0 1149 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Nek3Q9R0A5 511 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 N4bp2F8VQG7 1678 aaKnown RBP11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Myo3bQ1EG27 1305 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Krt78E9Q0F0 1068 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Dnajc21E9Q8D0 531 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 H2afxP27661 143 aaKnown RBP11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Hpcal4Q8BGZ1 191 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Efcab8Q8C9R9 203 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Ulbp1Q8HWA3 334 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Hps4Q99KG7 671 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 MybP06876 636 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Nr5a1P33242 462 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Tcp11Q01755 566 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Ckap2Q3V1H1 664 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 RragaQ80X95 313 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Taf6lQ8R2K4 616 aa11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Ssr1Q9CY50 286 aaKnown RBP11.6□□□□□ -0.55
Top1-201ENSMUST00000109468 Sall1Q9ER74 1322 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Stag2O35638 1231 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Abcb4P21440 1276 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Pdrg1P59048 133 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Cct5P80316 541 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 PcQ05920 1178 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Znf667Q2TL60 609 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Tspyl3Q3UYP3 334 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Igf2bp2Q5SF07 592 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Pramel6Q810Y9 485 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Ankrd23Q812A3 306 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Fam161bQ8CB59 589 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Krt79Q8VED5 531 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Erlin1Q91X78 346 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Apobec3Q99J72 440 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Dph6Q9CQ28 267 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Luc7lQ9CYI4 371 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Cbx8Q9QXV1 362 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Ddx23D3Z0M9 819 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Hmgb1P63158 215 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 DSCC1Q14AI0 399 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Slc9a1Q61165 820 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Ubxn1Q922Y1 297 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Trpm3Q5F4S9 1721 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 AW822073A0A0N4SUK1 652 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Gna11P21278 359 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Ddx10Q80Y44 875 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Srp68Q8BMA6 625 aaKnown RBP11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Lrrc41Q8K1C9 807 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Adcy3Q8VHH7 1145 aa11.59□□□□□ -0.55
Top1-201ENSMUST00000109468 Dnm2P39054 870 aaKnown RBP11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Prpf38aQ4FK66 312 aaKnown RBP11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Dnph1Q80VJ3 173 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Spata32Q8C5V0 334 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Tut1Q8R3F9 869 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Tktl2Q9D4D4 627 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Myo1hQ9D6A1 958 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Gm28919A0A087WP35 240 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Ankrd35E9Q9D8 996 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Parp1P11103 1013 aaKnown RBP11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Pth1rP41593 591 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Skap2Q3UND0 358 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Mkrn3Q60764 544 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Sirt2Q8VDQ8 389 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Smtnl1Q99LM3 459 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Dydc2Q9D3X8 139 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Nol7Q9D7Z3 254 aaKnown RBP11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Tfap4Q9JIZ5 338 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 MeiocA2AG06 965 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Trim55G3X8Y1 545 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Krt222Q8CCX5 294 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Slc4a8Q8JZR6 1089 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Card14Q99KF0 999 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 NenfQ9CQ45 171 aa11.58□□□□□ -0.56
Top1-201ENSMUST00000109468 Nfat5Q9WV30 1534 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Qtrt2B8ZXI1 415 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Samd15F6XZJ7 620 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Copb2O55029 905 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Gfpt1P47856 697 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Lrrc43Q3V0L5 667 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Krt40Q6IFX3 439 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Spice1Q8C804 860 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Spata4Q8K3V1 295 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Arhgef6Q8K4I3 771 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Vps37cQ8R105 352 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Mrpl12Q9DB15 201 aaKnown RBP11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Plcb1Q9Z1B3 1216 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Gm43738A0A0G2JEA5 862 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Frmd7A2AD83 703 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Vsnl1P62761 191 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Cdr2P97817 455 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Pls1Q3V0K9 630 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Hdac4Q6NZM9 1076 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 GypcQ78HU7 95 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Aggf1Q7TN31 711 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Sdad1Q80UZ2 687 aaKnown RBP11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Sugp2Q8CH09 1067 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Ano3A2AHL1 981 aa11.57□□□□□ -0.56
Top1-201ENSMUST00000109468 Ankrd63A2ARS0 390 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms