RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Usp31E9Q6Y8 1344 aa26.06■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Gtf3c3Q3TMP1 882 aa26.05■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Slitrk3Q810B9 980 aa26.05■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ndufa8Q9DCJ5 172 aa26.05■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Gm44503E9PYU5 387 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Copb2O55029 905 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Serpinb2P12388 415 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ppfia3P60469 1194 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Sap30bpQ02614 308 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Gpatch3Q8BIY1 525 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Fam83aQ8K2P2 436 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Vmn1r199Q8R280 367 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Dnaaf4Q8R368 420 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Myh7bA2AQP0 1941 aa26.04■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Fgfr2P21803 821 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Traf5P70191 558 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ccdc84Q4VA36 332 aaKnown RBP26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Lrrc24Q8BHA1 521 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Il31raQ8K5B1 716 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Dnttip2Q8R2M2 758 aaKnown RBP26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Cep89Q9CZX2 791 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Usp17ldG5E8G2 545 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Usp17lcG5E8I7 545 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Stag2O35638 1231 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Slain1Q68FF7 579 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Slc18a1Q8R090 521 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ero1bQ8R2E9 467 aa26.03■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ccdc88aQ5SNZ0 1873 aa26.02■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Zmynd8A2A484 1235 aaKnown RBP26.02■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Mms22lB1AUR6 1238 aa26.02■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ampd3O08739 766 aa26.02■■□□□ 1.76
Scn1b-201ENSMUST00000098548 VegfbP49766 207 aa26.02■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ifit1Q64282 463 aa26.02■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Haus6Q6NV99 933 aaKnown RBP26.02■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Myh8P13542 1937 aa26.01■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Arl14Q3SXC5 192 aa26.01■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Ranbp6Q8BIV3 1105 aa26.01■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Bri3bpQ8BXV2 253 aa26.01■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Gimap7Q8R379 293 aa26.01■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Stk38Q91VJ4 465 aa26.01■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Rfc4Q99J62 364 aa26.01■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Brca1P48754 1812 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 GnaqP21279 359 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Dnm1P39053 867 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Atoh1P48985 351 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Sh2d1b2Q45HK4 132 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Kctd1Q5M956 257 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 IqcgQ80W32 419 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Kdm4aQ8BW72 1064 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Sh3bgrQ9WUZ7 214 aa26■■□□□ 1.75
Scn1b-201ENSMUST00000098548 1700113H08RikE9Q9Q5 327 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 U2af2P26369 475 aaKnown RBP25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Ttbk2Q3UVR3 1243 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Mdh1bQ5F204 500 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Sp4Q62445 782 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Pxylp1Q8BHA9 480 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Dppa3Q8QZY3 150 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Rbm19Q8R3C6 952 aaKnown RBP25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Usp33Q8R5K2 909 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Prpf3Q922U1 683 aaKnown RBP25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Tdrd1Q99MV1 1172 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Usp28Q5I043 1051 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Epha10Q8BYG9 1007 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Arhgef6Q8K4I3 771 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Defb15Q8R2I5 79 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Stk39Q9Z1W9 556 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Btbd19S4R1I0 287 aa25.99■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Klhl34A2AI76 644 aa25.98■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Tmem109Q3UBX0 243 aa25.98■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Tfcp2l1Q3UNW5 479 aa25.98■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Swap70Q6A028 585 aaKnown RBP25.98■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Trnp1Q80ZI1 223 aa25.98■■□□□ 1.75
Scn1b-201ENSMUST00000098548 CerkQ8K4Q7 531 aa25.98■■□□□ 1.75
Scn1b-201ENSMUST00000098548 TnmdQ9EP64 317 aa25.98■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Prr14lE9Q7C4 1971 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Gm30191A0A0U1RNT7 187 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Dnai2A2AC93 623 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Sfi1Q3UZY0 1216 aaKnown RBP25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Tbc1d30Q69ZT9 766 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Ccp110Q7TSH4 1004 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Lrrc15Q80X72 579 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Vps37dQ810I0 261 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Ms4a5Q810P8 197 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Riox2Q8CD15 465 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Smc2Q8CG48 1191 aaKnown RBP25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Ubxn4Q8VCH8 506 aa25.97■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Ccnd3P30282 292 aa25.96■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Stxbp5lQ5DQR4 1185 aa25.96■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Acnat2Q8BGG9 420 aa25.96■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Pus7B7ZNL8 666 aaKnown RBP25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 SlkO54988 1233 aa25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Sptlc2P97363 560 aaKnown RBP25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Spryd7Q3TFQ1 196 aa25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Dync1li2Q6PDL0 492 aaKnown RBP25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Dcaf15Q6PFH3 600 aa25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Syne4Q8CII8 388 aa25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Lzts2Q91YU6 671 aa25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Zbtb22Q9Z0G7 638 aa25.95■■□□□ 1.75
Scn1b-201ENSMUST00000098548 Usp34Q6ZQ93 3582 aa25.95■■□□□ 1.74
Scn1b-201ENSMUST00000098548 A0A1Y7VML8 143 aa25.95■■□□□ 1.74
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms