RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tcp11Q01755 566 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Eif3j1Q3UGC7 261 aaKnown RBP13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Eif3j2Q66JS6 263 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Smarca1Q6PGB8 1046 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Olfr118Q7TRJ6 321 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Mxd3Q80US8 206 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Krt222Q8CCX5 294 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Sash3Q8K352 380 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Tube1Q9D6T1 475 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Cwc15Q9JHS9 229 aaKnown RBP13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Myo1cQ9WTI7 1063 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gm36210A0A1B0GS00 229 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 MthfslL7N466 203 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Atp1b3P97370 278 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Sec23aQ01405 765 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Top1Q04750 767 aaKnown RBP13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ica1lQ3TY65 431 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ehmt1Q5DW34 1296 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Prpf40bQ80W14 870 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 HlfQ8BW74 295 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Setdb2Q8C267 713 aa13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Matr3Q8K310 846 aaKnown RBP13.02□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Adam6bQ6IMH7 756 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 LpxnQ99N69 386 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Tmem39aQ9CYC3 486 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Akr1c19G3X9Y6 323 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Api5O35841 504 aaKnown RBP13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Stat5bP42232 786 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Slc14a2Q8R4T9 930 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Mtfr1lQ9CWE0 289 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gm11983V9GXS8 105 aa13.01□□□□□ -0.33
Col9a1-202ENSMUST00000088349 DccP70211 1447 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gm13023A2A8N2 498 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Trim30cD3YVI9 513 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Mum1l1Q4VA55 681 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Adck2Q6NSR3 617 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Myl6bQ8CI43 207 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Dbndd2Q9CRD4 158 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 RarsQ9D0I9 660 aaKnown RBP13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Dynll2Q9D0M5 89 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 FocadA2AKG8 1798 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 CluhQ5SW19 1315 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 GpiP06745 558 aaKnown RBP13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Islr2Q5RKR3 745 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Fhod1Q6P9Q4 1197 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Nyap1Q6PFX7 833 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Q8C5C9 218 aa13□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gm5134E9QAB5 671 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Skap2Q3UND0 358 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Fam193aQ8CGI1 1231 aaKnown RBP12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Prpf3Q922U1 683 aaKnown RBP12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Syf2Q9D198 242 aaKnown RBP12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Myo1hQ9D6A1 958 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Rcan1Q9JHG6 198 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Trp53inp1Q9QXE4 239 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Lama4P97927 1816 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 MetP16056 1379 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Cnbd1B1AWM0 430 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Kif23E9Q5G3 953 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Aak1Q3UHJ0 959 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Rbm12b2Q66JV4 834 aaKnown RBP12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Epha10Q8BYG9 1007 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 MtrrQ8C1A3 696 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ankrd63A2ARS0 390 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Otud7bB2RUR8 840 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Scgb2b19J3QM75 112 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Kif1bpQ6ZPU9 617 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 QarsQ8BML9 775 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Usp27Q8CEG8 438 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Uba5Q8VE47 403 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 AdarQ99MU3 1178 aaKnown RBP12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Bap1Q99PU7 728 aa12.99□□□□□ -0.33
Col9a1-202ENSMUST00000088349 4931408C20RikE9PWP9 1381 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ulk4Q3V129 1303 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 MeiocA2AG06 965 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gm4307E9PZY4 289 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Foxn2E9Q7L6 429 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gm4312K9J7E2 289 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Prl7d1P04769 244 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Slc7a3P70423 618 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Cct5P80316 541 aaKnown RBP12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Cdr2P97817 455 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Carmil2Q3V3V9 1296 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Nav1Q8CH77 1875 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Nr5a1P33242 462 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Traf3ip1Q149C2 625 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Rnf40Q3U319 1001 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Mars2Q499X9 586 aaKnown RBP12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Irak1Q62406 710 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Rasgrp4Q8BTM9 673 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Sugp2Q8CH09 1067 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 E2f4Q8R0K9 410 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 MypopQ8R4U1 393 aa12.98□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Dnajc21E9Q8D0 531 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Usp5P56399 858 aaKnown RBP12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Cct6bQ61390 531 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gimap8Q75N62 688 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ttc26Q8BS45 554 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Spata4Q8K3V1 295 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Calml3Q9D6P8 149 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms