RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Matr3Q8K310 846 aaKnown RBP11.78□□□□□ -0.52
Tro-201ENSMUST00000087253 Tube1Q9D6T1 475 aa11.78□□□□□ -0.52
Tro-201ENSMUST00000087253 StrcQ8VIM6 1809 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Gucy1a2F8VQK3 730 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Pbx1P41778 430 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Meis3P97368 378 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Q3TYL0 343 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Txndc16Q7TN22 820 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Spice1Q8C804 860 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Stn1Q8K2X3 378 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Sash3Q8K352 380 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Krt82Q99M74 516 aa11.77□□□□□ -0.52
Tro-201ENSMUST00000087253 Col20a1Q923P0 1320 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Myh7bA2AQP0 1941 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Prss40A6H6T1 365 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Stx8O88983 236 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Smarca1Q6PGB8 1046 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Prpf40bQ80W14 870 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Fam161bQ8CB59 589 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 MypopQ8R4U1 393 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Klc3Q91W40 508 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Myh4Q5SX39 1939 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 PpardP35396 440 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Cct5P80316 541 aaKnown RBP11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Fam193aQ8CGI1 1231 aaKnown RBP11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 CpvlQ9D3S9 478 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Tob2Q9JM55 345 aa11.77□□□□□ -0.53
Tro-201ENSMUST00000087253 Frmd7A2AD83 703 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 SfswapQ3USH5 945 aaKnown RBP11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Pus7lQ8CE46 702 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Usp27Q8CEG8 438 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Tmem39aQ9CYC3 486 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Syf2Q9D198 242 aaKnown RBP11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Ppp2r3dQ9Z176 491 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 MthfslL7N466 203 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Cdh15P33146 784 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Cdr2P97817 455 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Rnf40Q3U319 1001 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Skap2Q3UND0 358 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Nup133Q8R0G9 1155 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Sf3b3Q921M3 1217 aaKnown RBP11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Dbndd2Q9CRD4 158 aa11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Togaram1Q6A070 1776 aaKnown RBP11.76□□□□□ -0.53
Tro-201ENSMUST00000087253 Apol7aB2RT54 418 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Dnajc21E9Q8D0 531 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Api5O35841 504 aaKnown RBP11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Snrpa1P57784 255 aaKnown RBP11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Adam6bQ6IMH7 756 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Usp50Q6P8X6 390 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Znf771Q8BJ90 317 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Setdb2Q8C267 713 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Q8C5C9 218 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 LpxnQ99N69 386 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Trp53inp1Q9QXE4 239 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Nup188Q6ZQH8 1759 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Cnbd1B1AWM0 430 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Foxn2E9Q7L6 429 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Kifc2O08672 792 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Bnip3O55003 187 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Gnat2P50149 354 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Usp5P56399 858 aaKnown RBP11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Pde1cQ64338 706 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Adck2Q6NSR3 617 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Slf2Q6P9P0 1278 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Bsdc1Q80Y55 427 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 AdarQ99MU3 1178 aaKnown RBP11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Gm13023A2A8N2 498 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Kif23E9Q5G3 953 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 GpiP06745 558 aaKnown RBP11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Ehmt1Q5DW34 1296 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Madcam1Q61826 405 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Rbm12b2Q66JV4 834 aaKnown RBP11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Slc20a2Q80UP8 656 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Cfap69Q8BH53 942 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Miga2Q8BK03 593 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 Ccdc83Q9D4V3 305 aa11.75□□□□□ -0.53
Tro-201ENSMUST00000087253 AfdnQ9QZQ1 1820 aaKnown RBP11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Arhgap33Q80YF9 1305 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Akr1c19G3X9Y6 323 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Cct6bQ61390 531 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 HrQ61645 1182 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Irak1Q62406 710 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Olfr118Q7TRJ6 321 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Sept9Q80UG5 583 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 MtrrQ8C1A3 696 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Lrit1Q8K099 624 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Sar1bQ9CQC9 198 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Mtfr1lQ9CWE0 289 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 CluhQ5SW19 1315 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Otud7bB2RUR8 840 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Aknad1E9Q8N6 675 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Scgb2b19J3QM75 112 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Zfpm1O35615 995 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Sec23aQ01405 765 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Ctr9Q62018 1173 aaKnown RBP11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Sycp1Q62209 993 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Trim34aQ99PP6 485 aa11.74□□□□□ -0.53
Tro-201ENSMUST00000087253 Mapkapk5O54992 473 aa11.73□□□□□ -0.53
Tro-201ENSMUST00000087253 Pla2g4aP47713 748 aa11.73□□□□□ -0.53
Tro-201ENSMUST00000087253 Siah1aP61092 282 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 79.1 ms