RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 1700006A11RikB9EHI3 544 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Tm6sf1P58749 370 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Dpp8Q80YA7 892 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Slc9a7Q8BLV3 726 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Scfd1Q8BRF7 639 aaKnown RBP13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Fez1Q8K0X8 392 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Pspc1Q8R326 523 aaKnown RBP13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Mettl16Q9CQG2 553 aaKnown RBP13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Kdm8Q9CXT6 414 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Znf287Q9EQB9 759 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 TicrrQ8BQ33 1889 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ccdc188F6WEU2 249 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Col9a1Q05722 921 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Znf800Q0VEE6 662 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Sfi1Q3UZY0 1216 aaKnown RBP13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Vps54Q5SPW0 977 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Gas6Q61592 674 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Edrf1Q6GQV7 1239 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 BcrQ6PAJ1 1270 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 AclyQ91V92 1091 aaKnown RBP13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ppp4r3bQ922R5 820 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Rab30Q923S9 203 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ccdc39Q9D5Y1 937 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 PalmdQ9JHU2 551 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 1110002E22RikE0CYV9 1786 aa13.06□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Znf667Q2TL60 609 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Defb25Q30KN8 71 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Entpd7Q3TCT4 606 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Vps53Q8CCB4 832 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Cdk8Q8R3L8 464 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Mtmr14Q8VEL2 648 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Susd3Q9D176 269 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Galk1Q9R0N0 392 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 FAM186AQ9D9R9 1790 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Zscan4-ps1A0A1C7CYV3 506 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Mcmdc2E9Q956 681 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Gtf3c3Q3TMP1 882 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Kiaa1328Q6NZK5 612 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Adnp2Q8CHC8 1165 aaKnown RBP13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ca9Q8VHB5 437 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Nphp1Q9QY53 687 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ulk4Q3V129 1303 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Mia3Q8BI84 1930 aa13.05□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 EomesO54839 707 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Irs1P35569 1233 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Limch1Q3UH68 1057 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 WaplQ65Z40 1200 aaKnown RBP13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Swap70Q6A028 585 aaKnown RBP13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 3830417A13RikQ8BQJ2 303 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Astn1Q61137 1302 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Atp8b3Q6UQ17 1335 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Frmd7A2AD83 703 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Sema3fO88632 785 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ephb4P54761 987 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Phf24Q80TL4 400 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Golim4Q8BXA1 655 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 RnpepQ8VCT3 650 aaKnown RBP13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Zcchc18Q8VD24 393 aa13.04□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Myh7Q91Z83 1935 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Sox1P53783 391 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 MyrflQ3UN70 904 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Pold4Q9CWP8 107 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Szt2A2A9C3 3431 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Upf2A2AT37 1269 aaKnown RBP13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 CrcpO35427 148 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Trdmt1O55055 415 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Pou2f2Q00196 463 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 GabpaQ00422 454 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Srebf2Q3U1N2 1130 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Osbpl2Q8BX94 484 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Dynll2Q9D0M5 89 aa13.03□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Rnf123Q5XPI3 1314 aa13.02□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Slc23a4A0A0J9YUX7 615 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Ripor3A1L3T7 938 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Ano3A2AHL1 981 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 SafbD3YXK2 937 aaKnown RBP13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Rbp3P49194 1234 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Ehmt1Q5DW34 1296 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Ccdc125Q5U465 500 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Mybpc2Q5XKE0 1136 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Zbtb7bQ64321 544 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Alas1Q8VC19 642 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 MlphQ91V27 590 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 DaglbQ91WC9 669 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Atg13Q91YI1 516 aa13.02□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Tmem240B2RWJ3 173 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Bnip3O55003 187 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Eme2Q56A04 373 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Stxbp3Q60770 592 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Phlda1Q62392 405 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Fbxl21Q8BFZ4 434 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Rbm34Q8C5L7 375 aaKnown RBP13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Stard7Q8R1R3 373 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Trim12cD3Z3L3 497 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Adgrg6Q6F3F9 1165 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Usp6nlQ80XC3 819 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Cdkn2aipQ8BI72 563 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Tfip11Q9ERA6 838 aaKnown RBP13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Add2Q9QYB8 725 aa13.01□□□□□ -0.33
Ccdc60-202ENSMUST00000086483 Twf2Q9Z0P5 349 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms