RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Ptf1aQ9QX98 324 aa12.88□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Flt1P35969 1333 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Pabpc1lA2A5N3 607 aaKnown RBP12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Gucy1a2F8VQK3 730 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 MthfslL7N466 203 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Wnt7aP24383 349 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Gjb4Q02738 266 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Mdh1bQ5F204 500 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Ezh2Q61188 746 aaKnown RBP12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Ces3aQ63880 571 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Gpr101Q80T62 511 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Dlg1Q811D0 905 aaKnown RBP12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Ctdspl2Q8BG15 465 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Larp6Q8BN59 492 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Pde5aQ8CG03 865 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Kcnk13Q8R1P5 405 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Tesk2Q8VCT9 570 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Ces3bQ8VCU1 571 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Vps16Q920Q4 839 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 MbipQ99LQ1 341 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Brms1Q99N20 246 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Trpc5Q9QX29 975 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Nr2e3Q9QXZ7 395 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Vnn1Q9Z0K8 512 aa12.87□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Gm30191A0A0U1RNT7 187 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Flvcr1B2RXV4 560 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Ccdc85cE9Q6B2 420 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Bin1O08539 588 aaKnown RBP12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Sema3fO88632 785 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Pank2Q3U4S0 443 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Gxylt1Q3UHH8 404 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Pex1Q5BL07 1284 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Rasa3Q60790 834 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Cep128Q8BI22 1102 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Rbm19Q8R3C6 952 aaKnown RBP12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Scrn1Q9CZC8 414 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Mrps25Q9D125 171 aaKnown RBP12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Nek3Q9R0A5 511 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Nlrp5Q9R1M5 1163 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Sel1lQ9Z2G6 790 aa12.86□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Grin2dQ03391 1323 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Tspoap1Q7TNF8 1846 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Dhx8A2A4P0 1244 aaKnown RBP12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 1700003F12RikA2AKE5 210 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Eddm13E9Q7F5 164 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Kcna1P16388 495 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Cdh15P33146 784 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Lilrb3P97484 841 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 C87499Q3UX49 493 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Zkscan4Q5SZT6 480 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Usp49Q6P9L4 685 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Slu7Q8BHJ9 585 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Ppp1r11Q8K1L5 131 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Dnaaf4Q8R368 420 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Apobec3Q99J72 440 aaKnown RBP12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 LpxnQ99N69 386 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Arl6ip4Q9JM93 229 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 CluhQ5SW19 1315 aa12.85□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Nucb2P81117 420 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Gdf10P97737 476 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Large2Q5XPT3 690 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Adgrg6Q6F3F9 1165 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Haus6Q6NV99 933 aaKnown RBP12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Clca4aQ6Q473 924 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Ehd2Q8BH64 543 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Riox2Q8CD15 465 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Cd248Q91V98 765 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Atp12aQ9Z1W8 1035 aa12.84□□□□□ -0.35
Vamp1-202ENSMUST00000063588 Lbhd1A0A087WPA0 259 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Serpina16D3Z660 418 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Gm10134F6ZQC6 126 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 CnpP16330 420 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Tdo2P48776 406 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Sema3eP70275 775 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Psg29Q3URN6 468 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 PsdQ5DTT2 1024 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Gm2163Q6PCY5 473 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Ccdc172Q810N9 267 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Kctd3Q8BFX3 815 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Gga3Q8BMI3 718 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Scfd1Q8BRF7 639 aaKnown RBP12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Fam43aQ8BUP8 424 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Tor1aip2Q8BYU6 502 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Fermt2Q8CIB5 680 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 E2f4Q8R0K9 410 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Ppp2r5dQ91V89 594 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Tubgcp2Q921G8 905 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Hdac9Q99N13 588 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 ArcQ9WV31 396 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Mtmr9Q9Z2D0 545 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Homer1Q9Z2Y3 366 aa12.83□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Tmem132bF7BAB2 1078 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Tgfb2P27090 414 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Sdc2P43407 202 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Mmp14P53690 582 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Usp13Q5BKP2 858 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Tnni3kQ5GIG6 834 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Tbc1d9bQ5SVR0 1263 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 PrimpolQ6P1E7 537 aa12.82□□□□□ -0.36
Vamp1-202ENSMUST00000063588 Zbtb39Q6PDK0 712 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms