RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Bco2Q99NF1 532 aa21.5■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ralgps2Q9ERD6 590 aa21.5■■□□□ 1.03
Vti1b-201ENSMUST00000055262 1700013D24RikQ0P521 120 aa21.49■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ddx19aQ61655 478 aaKnown RBP21.49■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Katnbl1Q9CWJ3 299 aa21.49■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ulk4Q3V129 1303 aa21.49■■□□□ 1.03
Vti1b-201ENSMUST00000055262 GnaqP21279 359 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Traf1P39428 409 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Cct2P80314 535 aaKnown RBP21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 GclcP97494 637 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Pdlim7Q3TJD7 457 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Kif1bpQ6ZPU9 617 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Fbxo28Q8BIG4 368 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Bst2Q8R2Q8 172 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Syt5Q9R0N5 386 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ccdc88aQ5SNZ0 1873 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Igsf9bE9PZ19 1328 aa21.48■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Skint3A7TZF0 458 aa21.47■■□□□ 1.03
Vti1b-201ENSMUST00000055262 OgdhlE9Q7L0 1029 aa21.47■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ctdnep1Q3TP92 244 aa21.47■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Stxbp3Q60770 592 aa21.47■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ccp110Q7TSH4 1004 aa21.47■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Wdr19Q3UGF1 1341 aa21.47■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Elmsan1E9Q2I4 1089 aaKnown RBP21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Siglec10Q80ZE3 688 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Vgll2Q8BGW8 322 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ccdc178Q8CDV0 866 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Fez1Q8K0X8 392 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Iffo2Q8R2V2 512 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Pspc1Q8R326 523 aaKnown RBP21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 IrgqQ8VIM9 583 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Tdrd3Q91W18 743 aaKnown RBP21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Lzts2Q91YU6 671 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Tmod4Q9JLH8 345 aa21.46■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Stag2O35638 1231 aa21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Tph1P17532 447 aa21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Foxp1P58462 705 aa21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Kctd1Q5M956 257 aa21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Supt20hQ7TT00 530 aaKnown RBP21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Serpinb13Q8CDC0 389 aa21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Plcg2Q8CIH5 1265 aa21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 ArcQ9WV31 396 aa21.45■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Gm20425E9Q035 978 aaKnown RBP21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Hoxc10P31257 342 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 SrprbP47758 269 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Igfbp4P47879 254 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 FanccP50652 591 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Cplx2P84086 134 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Atp11aP98197 1187 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Clul1Q3ZRW6 464 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Tcp11l1Q8BTG3 509 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Dnai1Q8C0M8 701 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Znhit2Q9QY66 399 aa21.45■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Gm30191A0A0U1RNT7 187 aa21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Ppp1r9aH3BJD6 1292 aa21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Cdkl5Q3UTQ8 938 aa21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Rgl2Q61193 778 aa21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Nxf7Q80SZ6 620 aaKnown RBP21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Tbc1d5Q80XQ2 815 aa21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Slc4a8Q8JZR6 1089 aa21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Rtn1Q8K0T0 780 aa21.44■■□□□ 1.02
Vti1b-201ENSMUST00000055262 LdhbP16125 334 aaKnown RBP21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Morf4l1P60762 362 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Grm1P97772 1199 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Babam1Q3UI43 333 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Ces3aQ63880 571 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Gprasp2Q8BUY8 826 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Alg3Q8K2A8 438 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 MyripQ8K3I4 856 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Ces3bQ8VCU1 571 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Tfap4Q9JIZ5 338 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Cdc45Q9Z1X9 566 aa21.43■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Eef2kO08796 724 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 MyocO70624 490 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Btg1-ps1Q3V0S2 161 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Btg1-ps2Q3V0X0 161 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Nsrp1Q5NCR9 542 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Recql4Q75NR7 1216 aaKnown RBP21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Morc2bQ8C5W4 1022 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Inpp4aQ9EPW0 939 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Eif4enif1Q9EST3 983 aaKnown RBP21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Cd2apQ9JLQ0 637 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Tjp3Q9QXY1 905 aa21.42■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Trim5E9PV98 497 aa21.41■■□□□ 1.02
Vti1b-201ENSMUST00000055262 GabpaQ00422 454 aa21.41■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Ttbk2Q3UVR3 1243 aa21.41■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Atp13a3Q5XF89 1219 aa21.41■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Galnt17Q7TT15 598 aa21.41■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Triml1Q8BVP1 470 aa21.41■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Ttc8Q8VD72 515 aa21.41■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Celf5D3Z4T1 395 aaKnown RBP21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 OatP29758 439 aa21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Psmc4P54775 418 aa21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Armc2Q3URY6 854 aa21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Mdh1bQ5F204 500 aa21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Grm4Q68EF4 912 aa21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Ubap2lQ80X50 1107 aaKnown RBP21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Adgra1Q8C4G9 578 aa21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Ubac1Q8VDI7 409 aa21.4■■□□□ 1.02
Vti1b-201ENSMUST00000055262 Nr3c2Q8VII8 978 aa21.4■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms