RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Traf1P39428 409 aa18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Znf667Q2TL60 609 aa18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Gpbp1Q6NXH3 473 aaKnown RBP18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Setdb2Q8C267 713 aa18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Nat10Q8K224 1024 aaKnown RBP18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 E2f4Q8R0K9 410 aa18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tada3Q8R0L9 432 aa18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Scn11aQ9R053 1765 aa18.08■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Abcd1P48410 736 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 VrtnQ3SYK4 740 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Spg7Q3ULF4 781 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Zmym2Q9CU65 1376 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 CluhQ5SW19 1315 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Zfand4D3Z3C6 739 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tmem132bF7BAB2 1078 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Myo1aO88329 1043 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Rpusd2Q149F1 553 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 GypcQ78HU7 95 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tango6Q8C3S2 1079 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Hps4Q99KG7 671 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Dydc2Q9D3X8 139 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Itga2bQ9QUM0 1033 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Arhgef2Q60875 985 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Mfap3lQ9D3X9 409 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 EhhadhQ9DBM2 718 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tmem47Q9JJG6 181 aa18.07■□□□□ 0.48
Ckap4-201ENSMUST00000053871 H2afxP27661 143 aaKnown RBP18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 ItpripQ3TNL8 555 aa18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Prpf38aQ4FK66 312 aaKnown RBP18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Fam161bQ8CB59 589 aa18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Znf131Q8K3J5 619 aa18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 IkbkbO88351 757 aa18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Alppl2P24823 529 aa18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Pspc1Q8R326 523 aaKnown RBP18.06■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Krt78E9Q0F0 1068 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Rad23aP54726 363 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Igbp1Q61249 340 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tmem179Q8BHH9 233 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 HibadhQ99L13 335 aaKnown RBP18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Pla2g12bQ99P27 195 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 RabggtaQ9JHK4 567 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Copb1Q9JIF7 953 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tfap4Q9JIZ5 338 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 AW822073A0A0N4SUK1 652 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Gm4307E9PZY4 289 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Gm4312K9J7E2 289 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Vps33bP59016 617 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Scg2Q03517 617 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Ric8aQ3TIR3 530 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Adam6bQ6IMH7 756 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Ankrd13aQ80UP5 588 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Kiaa0319lQ8K135 1048 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Sh3tc1G3X9F6 1346 aa18.05■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Chp1P61022 195 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Olfr121Q5CZY0 321 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Egfl6Q9JJZ5 550 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Dpf1Q9QX66 387 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Mrpl12Q9DB15 201 aaKnown RBP18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Peak1Q69Z38 1735 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 A430078G23RikE9Q7Y4 484 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Adck2Q6NSR3 617 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Smarca1Q6PGB8 1046 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Atxn2lQ7TQH0 1049 aaKnown RBP18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Klhl40Q9D783 621 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 PdclQ9DBX2 301 aa18.04■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Ddx23D3Z0M9 819 aaKnown RBP18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Gcom1E9PZ54 550 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Kifc2O08672 792 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Eya3P97480 510 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 MyzapQ3UIJ9 466 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Ccdc122Q8BVN0 290 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Galntl5Q9D4M9 431 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Ccdc88aQ5SNZ0 1873 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Sh3bp1P55194 680 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Krt86P97861 486 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Spice1Q8C804 860 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Lrit1Q8K099 624 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Ccdc14Q8K2J4 934 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Q91WD4 421 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Pnpla6Q3TRM4 1355 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Znf609Q8BZ47 1413 aa18.03■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Gm3409A0A0G2JE67 319 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Gm28042B7ZCM9 1014 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tbc1d2bQ3U0J8 965 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tpm4Q6IRU2 248 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Mtss1lQ6P9S0 715 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Epc1Q8C9X6 813 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Fermt2Q8CIB5 680 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 MicalclQ9D5U9 680 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Tubb4aQ9D6F9 444 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Cd274Q9EP73 290 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Trappc10Q3TLI0 1259 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Snd1Q78PY7 910 aaKnown RBP18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Atp1a4Q9WV27 1032 aa18.02■□□□□ 0.48
Ckap4-201ENSMUST00000053871 Gm7356A0A087WSA6 508 aa18.02■□□□□ 0.47
Ckap4-201ENSMUST00000053871 GpiP06745 558 aaKnown RBP18.02■□□□□ 0.47
Ckap4-201ENSMUST00000053871 Dok7Q18PE0 504 aa18.02■□□□□ 0.47
Ckap4-201ENSMUST00000053871 RbsnQ80Y56 783 aa18.02■□□□□ 0.47
Ckap4-201ENSMUST00000053871 Zdhhc14Q8BQQ1 489 aa18.02■□□□□ 0.47
Ckap4-201ENSMUST00000053871 Tbc1d23Q8K0F1 684 aa18.02■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms