RNA–Protein interactions for RNA: ENSMUST00000033544.13

Brcc3-201, Transcript of Lys-63-specific deubiquitinase BRCC36, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Brcc3, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3-201ENSMUST00000033544 Gm12185Q5NCB2 835 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Cdcp1Q5U462 833 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Q8C5C9 218 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Mtfr1lQ9CWE0 289 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Golgb1E9PVZ8 3238 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Myh1Q5SX40 1942 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 1700017N19RikA0A087WPJ1 469 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Gm4307E9PZY4 289 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Kif23E9Q5G3 953 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Gm4312K9J7E2 289 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ube3aO08759 870 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 RaraP11416 462 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Cdh15P33146 784 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Riok1Q922Q2 567 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Bicdl1A0JNT9 577 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Pabpc4Q6PHQ9 660 aaKnown RBP10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Alx1Q8C8B0 326 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Mettl5Q8K1A0 209 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Tmem143Q8VD26 458 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Rnf34Q99KR6 376 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Abcf2Q99LE6 628 aaKnown RBP10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Stk11Q9WTK7 436 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 N4bp2F8VQG7 1678 aaKnown RBP10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Spata5Q3UMC0 893 aaKnown RBP10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 ItgadQ3V0T4 1168 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Phf8Q80TJ7 1023 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ublcp1Q8BGR9 318 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ciao1Q99KN2 339 aa10.95□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Slc39a2G3X943 309 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Usp5P56399 858 aaKnown RBP10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Asic1Q6NXK8 526 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Fchsd1Q6PFY1 688 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Klhl7Q8BUL5 586 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Mkrn1Q9QXP6 481 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 NalcnQ8BXR5 1738 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Setdb1O88974 1307 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 PtprvP70289 1705 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Gm5934D3Z4U6 212 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Gm10378F6XQQ1 160 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Api5O35841 504 aaKnown RBP10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Mapkapk5O54992 473 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Sept1P42209 366 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Klra4Q60651 263 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Zbed4Q80WQ9 1168 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Hexim1Q8R409 356 aaKnown RBP10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 ToporslQ9D2F8 683 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Sept14Q9DA97 430 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Sel1lQ9Z2G6 790 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Fam186bD3Z420 943 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Gm5134E9QAB5 671 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Kiaa1468Q148V7 1216 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Cnnm2Q3TWN3 875 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Atf3Q60765 181 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Krt42Q6IFX2 452 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 GphnQ8BUV3 769 aaKnown RBP10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Als2cr12Q8BVM7 383 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Erlin1Q91X78 346 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Lztr1Q9CQ33 837 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 SyncQ9EPM5 470 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Pex3Q9QXY9 372 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Wdr19Q3UGF1 1341 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Col20a1Q923P0 1320 aa10.94□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Simc1E9Q6E9 1354 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 MeiocA2AG06 965 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Sco1Q5SUC9 284 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ubxn1Q922Y1 297 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ccdc105Q9D4K7 499 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ube3bQ9ES34 1070 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 RabggtaQ9JHK4 567 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Nr5a1P33242 462 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Tmod1P49813 359 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Apopt1Q9CQW7 192 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Golph3Q9CRA5 298 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Peg12Q9WVA7 283 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Nfil3O08750 462 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 GpiP06745 558 aaKnown RBP10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Atp8a2P98200 1148 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ehmt1Q5DW34 1296 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Adam6bQ6IMH7 756 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 RragaQ80X95 313 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 NsmfQ99NF2 532 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Myh2G3UW82 1942 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Speer4aF8VPX6 267 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Scgb2b19J3QM75 112 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Cyp3a25O09158 503 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Cd3dP04235 173 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ssrp1Q08943 708 aaKnown RBP10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Serpinb6dQ3UWK8 375 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Kirrel3Q8BR86 778 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ccdc122Q8BVN0 290 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Vcpip1Q8CDG3 1220 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Pus7lQ8CE46 702 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Parp10Q8CIE4 960 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Dnajc28Q8VCE1 385 aa10.93□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Gm28510A0A087WP28 240 aa10.92□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Casp12O08736 419 aa10.92□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Zfp781Q0P5U5 243 aa10.92□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Ccdc42Q5SV66 316 aa10.92□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Tsr1Q5SWD9 803 aa10.92□□□□□ -0.66
Brcc3-201ENSMUST00000033544 Gpbp1Q6NXH3 473 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms