RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Golga1Q9CW79 758 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tmod4Q9JLH8 345 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Sept6Q9R1T4 434 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Aox2Q5SGK3 1345 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Gm6121L7MUF1 212 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 LdhbP16125 334 aaKnown RBP18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Mybpc2Q5XKE0 1136 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Retreg2Q6NS82 541 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Rbm41Q8JZV4 413 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Trim68Q8K243 485 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Trove2O08848 538 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 C130026I21RikQ8C898 291 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Appl2Q8K3G9 662 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Atp2a1Q8R429 994 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tpcn1Q9EQJ0 817 aa18.3■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Actn3O88990 900 aaKnown RBP18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 CnstQ8CBC4 711 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tcp1P11983 556 aaKnown RBP18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Fbxo11Q7TPD1 930 aaKnown RBP18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Bsdc1Q80Y55 427 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Mettl14Q3UIK4 456 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Trim52Q8CDV4 233 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Arl1P61211 181 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cct5P80316 541 aaKnown RBP18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Gngt1Q61012 74 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Zbtb7bQ64321 544 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Slc51bQ80WK2 128 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 NkapQ9D0F4 415 aaKnown RBP18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 DexiQ9WUQ7 95 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Suclg2Q9Z2I8 433 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tarbp1E9Q368 1579 aa18.29■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cyp3a57D3YYZ0 503 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Apol11aE9PZG0 334 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Samsn1P57725 372 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Traf5P70191 558 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 StrbpQ91WM1 672 aaKnown RBP18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Prkg1P0C605 671 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Stmn2P55821 179 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 EsrrbQ61539 433 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Crybg3Q80W49 1005 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Mfap3Q922T2 349 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 4930548H24RikQ9D496 437 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Gpaa1Q9WTK3 621 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Pex11aQ9Z211 246 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Kif1bQ60575 1816 aaKnown RBP18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Kcnb2A6H8H5 907 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tbx22Q8K402 517 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Cplx3Q8R1B5 158 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Copb1Q9JIF7 953 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 AdkP55264 361 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Fam83bQ0VBM2 1012 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Eno4Q8C042 619 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 PdclQ9DBX2 301 aa18.28■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Hspa2P17156 633 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ovgp1Q62010 721 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tmem191cQ9JJB1 302 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ccdc13D3YV10 709 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 DgkiD3YWQ0 1071 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Ppp2r5eQ61151 467 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Madcam1Q61826 405 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Krt39Q6IFX4 482 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tbc1d31Q6NXY1 996 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Krt222Q8CCX5 294 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Mylk2Q8VCR8 613 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 Tfap4Q9JIZ5 338 aa18.27■□□□□ 0.52
Ubfd1-201ENSMUST00000033158 DeptorQ570Y9 409 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Pabpn1lQ5XFR0 273 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Mknk2Q8CDB0 459 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Gpr108Q91WD0 569 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Nrbp1Q99J45 535 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 1700020D05RikQ99PB1 294 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Trmt112Q9DCG9 125 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 P2rx7Q9Z1M0 595 aa18.27■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 A0A1Y7VML8 143 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Lekr1B2RVN1 116 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Taf4E9QAP7 1042 aaKnown RBP18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Zbtb7aO88939 569 aaKnown RBP18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 H2afzP0C0S6 128 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 H2afvQ3THW5 128 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Rilpl1Q9JJC6 406 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Speer3W4VSP1 261 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Nhej1Q3KNJ2 295 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Plcd3Q8K2J0 785 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Filip1Q9CS72 1211 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Stk39Q9Z1W9 556 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Prr5lA2AVJ5 370 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 DSCC1Q14AI0 399 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Vps41Q5KU39 853 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Arhgap24Q8C4V1 747 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Ppil4Q9CXG3 492 aaKnown RBP18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Eef1gQ9D8N0 437 aaKnown RBP18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Sept3Q9Z1S5 350 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Abcc3B2RX12 1523 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Ccdc152E9PX14 254 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Idh1O88844 414 aaKnown RBP18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 FosP01101 380 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Usp28Q5I043 1051 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Cbx6Q9DBY5 414 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Actn2Q9JI91 894 aa18.26■□□□□ 0.51
Ubfd1-201ENSMUST00000033158 Plch2A2AP18 1501 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms