RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Sestd1Q80UK0 696 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Dhx58Q99J87 678 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Q9D9S1 216 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ndst4Q9EQW8 872 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nek3Q9R0A5 511 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Znf394Q9Z1D9 521 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 P2rx7Q9Z1M0 595 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 PaskQ8CEE6 1383 aa12.79□□□□□ -0.36
Trim55-201ENSMUST00000029139 Itih3Q61704 889 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ptpdc1Q6NZK8 747 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tdpoz4Q6YCH2 370 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Nrde2Q80XC6 1172 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cep55Q8BT07 462 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Hnrnpul1Q8VDM6 859 aaKnown RBP12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Acsbg1Q99PU5 721 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Luc7lQ9CYI4 371 aaKnown RBP12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Trem1Q9JKE2 230 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cacna2d3Q9Z1L5 1091 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Mybbp1aQ7TPV4 1344 aaKnown RBP12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Itsn1Q9Z0R4 1714 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Psmc1P62192 440 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tbx2Q60707 711 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Dpf2Q61103 391 aaKnown RBP12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cct6bQ61390 531 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tsen2Q6P7W5 460 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 OscarQ8VBT3 265 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Lmcd1Q8VEE1 365 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tmem53Q9D0Z3 276 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Cyth1Q9QX11 398 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tecpr2Q3UH45 1423 aa12.78□□□□□ -0.36
Trim55-201ENSMUST00000029139 A0A0U1RNP2 1173 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ttll3A4Q9E5 927 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 Stim2P83093 746 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ccbe1Q3MI99 408 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 Ppp1r14bQ62084 147 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 Man2a2Q8BRK9 1152 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 OplahQ8K010 1288 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 Spdl1Q923A2 608 aa12.77□□□□□ -0.36
Trim55-201ENSMUST00000029139 Gm28360A0A087WR25 190 aa12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 Atxn10P28658 475 aa12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 MamstrQ0ZCJ7 421 aa12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 Washc4Q3UMB9 1173 aa12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 Thrap3Q569Z6 951 aaKnown RBP12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 IrgcQ8C262 412 aa12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 Leng8Q8CBY3 785 aaKnown RBP12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 Slc35b4Q8CIA5 331 aa12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 Tulp1Q9Z273 543 aa12.77□□□□□ -0.37
Trim55-201ENSMUST00000029139 Ctnnd1P30999 938 aaKnown RBP12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Trim43bP86448 445 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Pyroxd1Q3TMV7 498 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Rapgefl1Q68EF8 662 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Znf830Q8R1N0 363 aaKnown RBP12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Rpa1Q8VEE4 623 aaKnown RBP12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Smap1Q91VZ6 440 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Usb1Q91W78 267 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Ccdc182Q9D9C6 152 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Tuba8Q9JJZ2 449 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Sart1Q9Z315 806 aaKnown RBP12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Aox2Q5SGK3 1345 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Myo3aQ8K3H5 1613 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Palm3A2TJV2 734 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Prim1P20664 417 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Prdm10Q3UTQ7 1184 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Fam160a1Q505K2 1081 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 GcgrQ61606 485 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Chmp2bQ8BJF9 213 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Pcdha3Q91Y16 942 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Tex13bQ99MW5 186 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Sgf29Q9DA08 293 aaKnown RBP12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Sil1Q9EPK6 465 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Mapk8ip1Q9WVI9 707 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Grin2dQ03391 1323 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Uhrf1bp1B2KF50 1429 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Cavin4A2AMM0 362 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Fam47eD3YWC7 402 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Gnai2P08752 355 aaKnown RBP12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Hoxa10P31310 416 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Kdm2aP59997 1161 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Gsdma3Q5Y4Y6 464 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Retreg2Q6NS82 541 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Tsr2Q8C8T8 191 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Enox2Q8R0Z2 598 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Slc52a2Q9D8F3 450 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Sh3glb1Q9JK48 365 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Mlh1Q9JK91 760 aa12.76□□□□□ -0.37
Trim55-201ENSMUST00000029139 Znf335A2A5K6 1337 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Pabpc1lA2A5N3 607 aaKnown RBP12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Gm21969J3QJZ1 289 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Gna14P30677 355 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Agbl1Q09M05 972 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 TchpQ3TVW5 497 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 E2f5Q61502 335 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Psd4Q8BLR5 1005 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Cep57Q8CEE0 500 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Iffo2Q8R2V2 512 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Basp1Q91XV3 226 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Uap1Q91YN5 522 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 ZwintQ9CQU5 252 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 UvssaQ9D479 717 aa12.75□□□□□ -0.37
Trim55-201ENSMUST00000029139 Eif3fQ9DCH4 361 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms