RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Clip2Q9Z0H8 1047 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Q66JV7 365 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Tpm4Q6IRU2 248 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Copb1Q9JIF7 953 aa16.98■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Gm3893E9Q1I1 302 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Rpusd2Q149F1 553 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Znf667Q2TL60 609 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Armc2Q3URY6 854 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Kiaa0319lQ8K135 1048 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Mis18aQ9CZJ6 204 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ccdc88aQ5SNZ0 1873 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ecm29Q6PDI5 1840 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Zmym2Q9CU65 1376 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ugt1a8D3Z748 530 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ugt1a10E9PXN7 530 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 NfixP70257 488 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Aggf1Q7TN31 711 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Tmem179Q8BHH9 233 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Q91WD4 421 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 AmfrQ9R049 643 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 AW822073A0A0N4SUK1 652 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Rbm5Q91YE7 815 aaKnown RBP16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 RtcbQ99LF4 505 aaKnown RBP16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Dydc2Q9D3X8 139 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Nr2e3Q9QXZ7 395 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Zranb2Q9R020 330 aaKnown RBP16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Zfyve9A2A8R0 1397 aa16.97■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Plekhg2Q6KAU7 1340 aa16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Gm5580A0A0N4SVP8 411 aa16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Ccdc51Q3URS9 406 aa16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Abhd2Q9QXM0 425 aa16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Slc39a2G3X943 309 aa16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Eps8l1Q8R5F8 716 aa16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Mmtag2Q99LX5 260 aaKnown RBP16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Egfl6Q9JJZ5 550 aa16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Uso1Q9Z1Z0 959 aaKnown RBP16.96■□□□□ 0.31
Nkx3-1-201ENSMUST00000022646 Rsrc2A2RTL5 376 aaKnown RBP16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Txndc16Q7TN22 820 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Zdhhc14Q8BQQ1 489 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ildr1Q8CBR1 537 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tube1Q9D6T1 475 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Sh3tc1G3X9F6 1346 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Krt78E9Q0F0 1068 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Kcna1P16388 495 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 GnaqP21279 359 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Kif2aP28740 705 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Rc3h1Q4VGL6 1130 aaKnown RBP16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Fxr1Q61584 677 aaKnown RBP16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Cnnm4Q69ZF7 771 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gpbp1Q6NXH3 473 aaKnown RBP16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Sgsm1Q8BPQ7 1093 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Q8C5C9 218 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Phldb2Q8K1N2 1249 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tmem47Q9JJG6 181 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Btn2a2A4QPC6 514 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Apol7aB2RT54 418 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gm4307E9PZY4 289 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gm4312K9J7E2 289 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gas1Q01721 343 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Rasgrp4Q8BTM9 673 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 LRWD1Q8BUI3 648 aaKnown RBP16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tango6Q8C3S2 1079 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 MicalclQ9D5U9 680 aa16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Mrpl12Q9DB15 201 aaKnown RBP16.95■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Aco1P28271 889 aaKnown RBP16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Nap1l2P51860 460 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Irx2P81066 474 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Kif22Q3V300 660 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Madcam1Q61826 405 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ccdc122Q8BVN0 290 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Lonp2Q9DBN5 852 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Pex3Q9QXY9 372 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 A0A1W2P6Q8 802 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gm9048A0A1W2P7H4 802 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 A0A1W2P7Z8 802 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gm9046A0A1W2P855 802 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Kif23E9Q5G3 953 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tmem132bF7BAB2 1078 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Slurp2P0DP59 97 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Igbp1Q61249 340 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Klhl10Q9D5V2 608 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Mss51Q9D5Z5 446 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Arpp21Q9DCB4 807 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Atp1a4Q9WV27 1032 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Slfn1Q9Z0I7 337 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ltn1Q6A009 1767 aa16.94■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Gcom1E9PZ54 550 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 MyzapQ3UIJ9 466 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Prpf38aQ4FK66 312 aaKnown RBP16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Ccdc38Q8CDN8 563 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 HibadhQ99L13 335 aaKnown RBP16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Krt82Q99M74 516 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Krtap5-3Q9D226 196 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Psmd10Q9Z2X2 231 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Herc3A6H6S0 1050 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Tpp1O89023 562 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 PpardP35396 440 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Usp5P56399 858 aaKnown RBP16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Dnph1Q80VJ3 173 aa16.93■□□□□ 0.3
Nkx3-1-201ENSMUST00000022646 Prpf40bQ80W14 870 aa16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms