RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeast

Gene GPN3, Length 819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPN3	YLR243W	MGM1	P32266	881 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	NUP120	P35729	1037 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	VPS24	P36095	224 aa	Known RBP	4.21	□□□□□ -1.74
GPN3	YLR243W	MRPL36	P36531	177 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	SPC97	P38863	823 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	YIL152W	P40455	235 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	ASG1	P40467	964 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	ASE1	P50275	885 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	ASI1	P54074	624 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	VID22	Q05934	901 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	YOL159C	Q08300	171 aa		4.21	□□□□□ -1.74
GPN3	YLR243W	ERG8	P24521	451 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	STE50	P25344	346 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	SRB5	P32585	307 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	MRS6	P32864	603 aa	Known RBP	4.2	□□□□□ -1.74
GPN3	YLR243W	ATO2	P32907	282 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	XRS2	P33301	854 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	PTH2	P34222	208 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	SCO2	P38072	301 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	AXL2	P38928	823 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	YIR016W	P40572	265 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	MDV1	P47025	714 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	MRPL1	Q04599	285 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	PSK2	Q08217	1101 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	GPN2	Q08726	347 aa	Predicted RBP	4.2	□□□□□ -1.74
GPN3	YLR243W	YOR019W	Q99248	730 aa		4.2	□□□□□ -1.74
GPN3	YLR243W	MRP2	P10663	115 aa	Predicted RBP	4.19	□□□□□ -1.74
GPN3	YLR243W	AAP1	P37898	856 aa	Known RBP	4.19	□□□□□ -1.74
GPN3	YLR243W	PSY4	P38193	441 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	ECM10	P39987	644 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	FMP10	P40098	244 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	YFR020W	P43600	232 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	DCP2	P53550	970 aa	Known RBP	4.19	□□□□□ -1.74
GPN3	YLR243W	PFA5	Q03289	374 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	CAC2	Q04199	468 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	YMR034C	Q05131	434 aa	Predicted RBP	4.19	□□□□□ -1.74
GPN3	YLR243W	GSH2	Q08220	491 aa		4.19	□□□□□ -1.74
GPN3	YLR243W	PWP2	P25635	923 aa	Known RBP	4.18	□□□□□ -1.74
GPN3	YLR243W	LEU5	P38702	357 aa		4.18	□□□□□ -1.74
GPN3	YLR243W	PFK26	P40433	827 aa	Known RBP	4.18	□□□□□ -1.74
GPN3	YLR243W	IST3	P40565	148 aa	Predicted RBP	4.18	□□□□□ -1.74
GPN3	YLR243W	YGR021W	P53212	290 aa		4.18	□□□□□ -1.74
GPN3	YLR243W	IZH1	Q03419	316 aa		4.18	□□□□□ -1.74
GPN3	YLR243W	SNA4	Q07549	140 aa		4.18	□□□□□ -1.74
GPN3	YLR243W	MLH2	Q07980	695 aa		4.18	□□□□□ -1.74
GPN3	YLR243W	YFL068W	P0CX99	160 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	YLL066W-A	P0CY00	160 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	YLL067W-A	P0CY01	160 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	YCR043C	P25361	127 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	TEF4	P36008	412 aa	Known RBP	4.17	□□□□□ -1.74
GPN3	YLR243W	CTK2	P46962	323 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	YTP1	P53584	459 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	FCP1	Q03254	732 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	RSM28	Q03430	361 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	SWF1	Q04629	336 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	YLR049C	Q12110	428 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	SSM4	P40318	1319 aa		4.17	□□□□□ -1.74
GPN3	YLR243W	LHS1	P36016	881 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	SEC31	P38968	1273 aa	Known RBP	4.16	□□□□□ -1.74
GPN3	YLR243W	SEC24	P40482	926 aa	Known RBP	4.16	□□□□□ -1.74
GPN3	YLR243W	VPS25	P47142	202 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	MAK10	Q02197	733 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	YML131W	Q03102	365 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	ECM16	Q04217	1267 aa	Known RBP	4.16	□□□□□ -1.74
GPN3	YLR243W	SNO4	Q04902	237 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	DSE3	Q08729	430 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	HSP33	Q08914	237 aa	Known RBP	4.16	□□□□□ -1.74
GPN3	YLR243W	HSP32	Q08992	237 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	UBX3	Q12229	455 aa		4.16	□□□□□ -1.74
GPN3	YLR243W	TKL1	P23254	680 aa	Known RBP	4.15	□□□□□ -1.75
GPN3	YLR243W	MRP20	P32387	263 aa		4.15	□□□□□ -1.75
GPN3	YLR243W	SOF1	P33750	489 aa	Known RBP	4.15	□□□□□ -1.75
GPN3	YLR243W	TFC3	P34111	1160 aa		4.15	□□□□□ -1.75
GPN3	YLR243W	MNN2	P38069	597 aa		4.15	□□□□□ -1.75
GPN3	YLR243W	ARC40	P38328	384 aa	Known RBP	4.15	□□□□□ -1.75
GPN3	YLR243W	YER010C	P40011	234 aa		4.15	□□□□□ -1.75
GPN3	YLR243W	HXT9	P40885	567 aa		4.15	□□□□□ -1.75
GPN3	YLR243W	UBP8	P50102	471 aa		4.15	□□□□□ -1.75
GPN3	YLR243W	ARP9	Q05123	467 aa		4.15	□□□□□ -1.75
GPN3	YLR243W	YLR302C	O13544	120 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	RPB2	P08518	1224 aa	Known RBP	4.14	□□□□□ -1.75
GPN3	YLR243W	TRX2	P22803	104 aa	Known RBP	4.14	□□□□□ -1.75
GPN3	YLR243W	CNS1	P33313	385 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	MRX1	P40050	688 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	RIC1	P40395	1056 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	VPS4	P52917	437 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	ESBP6	P53918	673 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	DIG1	Q03063	452 aa	Known RBP	4.14	□□□□□ -1.75
GPN3	YLR243W	PSR2	Q07949	397 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	SRL1	Q08673	210 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	ATG9	Q12142	997 aa		4.14	□□□□□ -1.75
GPN3	YLR243W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
GPN3	YLR243W	CLB2	P24869	491 aa		4.13	□□□□□ -1.75
GPN3	YLR243W	SLC1	P33333	303 aa		4.13	□□□□□ -1.75
GPN3	YLR243W	UME6	P39001	836 aa		4.13	□□□□□ -1.75
GPN3	YLR243W	IME4	P41833	600 aa		4.13	□□□□□ -1.75
GPN3	YLR243W	TES1	P41903	349 aa	Known RBP	4.13	□□□□□ -1.75
GPN3	YLR243W	SGF73	P53165	657 aa		4.13	□□□□□ -1.75
GPN3	YLR243W	BOP3	P53958	396 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms