RNA–Protein interactions for RNA: YKL099C

UTP11, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP11, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP11	YKL099C	YKL151C	P36059	337 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	PXL1	P36166	706 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	ATG14	P38270	344 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	NPR3	P38742	1146 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	BCD1	P38772	366 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	ELO1	P39540	310 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	PRM9	P39551	298 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	RPS26A	P39938	119 aa	Known RBP	4.11	□□□□□ -1.75
UTP11	YKL099C	RPS26B	P39939	119 aa	Known RBP	4.11	□□□□□ -1.75
UTP11	YKL099C	EDC3	P39998	551 aa	Known RBP	4.11	□□□□□ -1.75
UTP11	YKL099C	AIP1	P46680	615 aa	Known RBP	4.11	□□□□□ -1.75
UTP11	YKL099C	YPT11	P48559	417 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	ASN2	P49090	572 aa	Known RBP	4.11	□□□□□ -1.75
UTP11	YKL099C	MNT2	P53059	558 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	RIM8	P53179	542 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	PEX31	P53203	462 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	YGR283C	P53336	341 aa	Predicted RBP	4.11	□□□□□ -1.75
UTP11	YKL099C	YTP1	P53584	459 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	VAC7	P53950	1165 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	SIW14	P53965	281 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	SND1	Q04007	877 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	YPR114W	Q06107	315 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	YPR078C	Q06813	372 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	THI21	Q08975	551 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	PEX11	Q12462	236 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	SEC39	Q12745	709 aa		4.11	□□□□□ -1.75
UTP11	YKL099C	MEC1	P38111	2368 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	SOD2	P00447	233 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	GAL4	P04386	881 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	MKK2	P32491	506 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	ABD1	P32783	436 aa	Predicted RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	MRS6	P32864	603 aa	Known RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	MRP4	P32902	394 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	KAP104	P38217	918 aa	Known RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	FSH1	P38777	243 aa	Known RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	LYS9	P38999	446 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	PTI1	P39927	425 aa	Predicted RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	CCT5	P40413	562 aa	Known RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	PAN6	P40459	309 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	MRPS18	P42847	217 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	RPS10B	P46784	105 aa	Known RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	SPC105	P53148	917 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	REG1	Q00816	1014 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	YDR132C	Q03900	495 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	PPN1	Q04119	674 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	UFO1	Q04511	668 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	RPS10A	Q08745	105 aa	Predicted RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	YOR389W	Q08912	624 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	APL5	Q08951	932 aa	Known RBP	4.1	□□□□□ -1.75
UTP11	YKL099C	YPL278C	Q08990	100 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	SEY1	Q99287	776 aa		4.1	□□□□□ -1.75
UTP11	YKL099C	RPS3	P05750	240 aa	Known RBP	4.09	□□□□□ -1.75
UTP11	YKL099C	ABF1	P14164	731 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	PMA2	P19657	947 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	MRPL8	P22353	238 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	RBK1	P25332	333 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	PMT1	P33775	817 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	TRZ1	P36159	838 aa	Predicted RBP	4.09	□□□□□ -1.75
UTP11	YKL099C	JNM1	P36224	373 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	ADE17	P38009	592 aa	Known RBP	4.09	□□□□□ -1.75
UTP11	YKL099C	MSR1	P38714	643 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	TDA3	P38758	523 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	LRP1	P38801	184 aa	Known RBP	4.09	□□□□□ -1.75
UTP11	YKL099C	SMF1	P38925	575 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	YIL054W	P40524	105 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	SNZ3	P43545	298 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	YFL054C	P43549	646 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	PHO86	P46956	311 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	TNA1	P53322	534 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	SNZ2	P53824	298 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	HOS3	Q02959	697 aa	Known RBP	4.09	□□□□□ -1.75
UTP11	YKL099C	SIZ1	Q04195	904 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	ARG7	Q04728	441 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	YDL073W	Q07454	984 aa		4.09	□□□□□ -1.75
UTP11	YKL099C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
UTP11	YKL099C	ETT1	Q08421	412 aa	Known RBP	4.09	□□□□□ -1.75
UTP11	YKL099C	GCR1	P07261	785 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	RIP1	P08067	215 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	SPS1	P08458	490 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	YKR104W	P0CE69	306 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	SCH9	P11792	824 aa	Known RBP	4.08	□□□□□ -1.76
UTP11	YKL099C	PUT4	P15380	627 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	MNE1	P24720	663 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	SNT1	P25357	1226 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	BEM1	P29366	551 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	UTP20	P35194	2493 aa	Known RBP	4.08	□□□□□ -1.76
UTP11	YKL099C	YET1	P35723	206 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	MIC60	P36112	540 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	EFM2	P38347	419 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	YEL028W	P39989	153 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	ALR2	P43553	858 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	ROK1	P45818	564 aa	Predicted RBP	4.08	□□□□□ -1.76
UTP11	YKL099C	CTK3	P46963	296 aa	Predicted RBP	4.08	□□□□□ -1.76
UTP11	YKL099C	MNN11	P46985	422 aa	Known RBP	4.08	□□□□□ -1.76
UTP11	YKL099C	GLG2	P47011	380 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	MRX6	P48564	524 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	TIM13	P53299	105 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	HST1	P53685	503 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	ESBP6	P53918	673 aa		4.08	□□□□□ -1.76
UTP11	YKL099C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms