RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C ENT2Q05785 613 aa2.12□□□□□ -2.07
BRE1YDL074C HRD3Q05787 833 aa2.12□□□□□ -2.07
BRE1YDL074C NUT2Q06213 157 aa2.12□□□□□ -2.07
BRE1YDL074C UAF30Q08747 228 aa2.12□□□□□ -2.07
BRE1YDL074C SNX3Q08826 162 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C LEA1Q08963 238 aaPredicted RBP2.12□□□□□ -2.07
BRE1YDL074C TGL5Q12043 749 aa2.12□□□□□ -2.07
BRE1YDL074C MNL2Q12205 849 aa2.12□□□□□ -2.07
BRE1YDL074C MAM3Q12296 706 aa2.12□□□□□ -2.07
BRE1YDL074C YDR461C-AQ2V2P7 80 aa2.12□□□□□ -2.07
BRE1YDL074C ADF1Q2V2Q1 113 aa2.12□□□□□ -2.07
BRE1YDL074C NHA1Q99271 985 aa2.12□□□□□ -2.07
BRE1YDL074C COX6P00427 148 aa2.12□□□□□ -2.07
BRE1YDL074C CBP2P03874 630 aaPredicted RBP2.12□□□□□ -2.07
BRE1YDL074C ABF1P14164 731 aa2.12□□□□□ -2.07
BRE1YDL074C PDC5P16467 563 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C SEC15P22224 910 aa2.12□□□□□ -2.07
BRE1YDL074C TRX2P22803 104 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C AAT2P23542 418 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C MIH1P23748 554 aa2.12□□□□□ -2.07
BRE1YDL074C ERG6P25087 383 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C RAD14P28519 371 aa2.12□□□□□ -2.07
BRE1YDL074C COX13P32799 129 aa2.12□□□□□ -2.07
BRE1YDL074C ETP1P38748 585 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C MNN1P39106 762 aa2.12□□□□□ -2.07
BRE1YDL074C FHL1P39521 936 aa2.12□□□□□ -2.07
BRE1YDL074C EDC3P39998 551 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C YER034WP40022 185 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C SCS2P40075 244 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C BTT1P40314 149 aaPredicted RBP2.12□□□□□ -2.07
BRE1YDL074C IRC24P40580 263 aa2.12□□□□□ -2.07
BRE1YDL074C SEC26P41810 973 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C CNN1P43618 361 aa2.12□□□□□ -2.07
BRE1YDL074C NUP85P46673 744 aa2.12□□□□□ -2.07
BRE1YDL074C STB4P50104 949 aa2.12□□□□□ -2.07
BRE1YDL074C SCS3P53012 380 aa2.12□□□□□ -2.07
BRE1YDL074C MCM6P53091 1017 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C YGL108CP53139 140 aa2.12□□□□□ -2.07
BRE1YDL074C USE1P53146 245 aa2.12□□□□□ -2.07
BRE1YDL074C COG2P53271 262 aa2.12□□□□□ -2.07
BRE1YDL074C VPS62P53285 467 aa2.12□□□□□ -2.07
BRE1YDL074C GTR2P53290 341 aa2.12□□□□□ -2.07
BRE1YDL074C ARC35P53731 342 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C DSL1P53847 754 aa2.12□□□□□ -2.07
BRE1YDL074C YNL011CP53980 444 aa2.12□□□□□ -2.07
BRE1YDL074C YNL010WP53981 241 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C CEG1Q01159 459 aaPredicted RBP2.12□□□□□ -2.07
BRE1YDL074C PRP3Q03338 469 aaPredicted RBP2.12□□□□□ -2.07
BRE1YDL074C ACL4Q03771 387 aa2.12□□□□□ -2.07
BRE1YDL074C BUD22Q04347 519 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C HEL2Q05580 639 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C ATG38Q05789 226 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C NDL1Q06568 189 aa2.12□□□□□ -2.07
BRE1YDL074C SWC7Q06707 132 aa2.12□□□□□ -2.07
BRE1YDL074C SYT1Q06836 1226 aa2.12□□□□□ -2.07
BRE1YDL074C YLR012CQ07927 99 aa2.12□□□□□ -2.07
BRE1YDL074C AHA1Q12449 350 aaKnown RBP2.12□□□□□ -2.07
BRE1YDL074C OCA6Q12454 224 aa2.12□□□□□ -2.07
BRE1YDL074C CIT2P08679 460 aa2.11□□□□□ -2.07
BRE1YDL074C YSP3P25036 478 aa2.11□□□□□ -2.07
BRE1YDL074C GFD2P25370 566 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C SPS22P25380 463 aa2.11□□□□□ -2.07
BRE1YDL074C VAC17P25591 423 aa2.11□□□□□ -2.07
BRE1YDL074C RPL5P26321 297 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C PHO91P27514 894 aa2.11□□□□□ -2.07
BRE1YDL074C MCM5P29496 775 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C ZIP1P31111 875 aa2.11□□□□□ -2.07
BRE1YDL074C PYC2P32327 1180 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C DGR2P32330 852 aa2.11□□□□□ -2.07
BRE1YDL074C DAL1P32375 460 aa2.11□□□□□ -2.07
BRE1YDL074C MF(ALPHA)2P32435 120 aa2.11□□□□□ -2.07
BRE1YDL074C AEP1P32493 518 aa2.11□□□□□ -2.07
BRE1YDL074C SRP101P32916 621 aa2.11□□□□□ -2.07
BRE1YDL074C WHI3P34761 661 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C HES1P35843 434 aa2.11□□□□□ -2.07
BRE1YDL074C UIP5P36137 443 aa2.11□□□□□ -2.07
BRE1YDL074C TFA2P36145 328 aa2.11□□□□□ -2.07
BRE1YDL074C YKR078WP36158 585 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C POL12P38121 705 aaPredicted RBP2.11□□□□□ -2.07
BRE1YDL074C YBR284WP38150 797 aa2.11□□□□□ -2.07
BRE1YDL074C YBP1P38315 674 aa2.11□□□□□ -2.07
BRE1YDL074C ATG12P38316 186 aa2.11□□□□□ -2.07
BRE1YDL074C SLX1P38324 304 aa2.11□□□□□ -2.07
BRE1YDL074C TRM5P38793 499 aa2.11□□□□□ -2.07
BRE1YDL074C STN1P38960 494 aa2.11□□□□□ -2.07
BRE1YDL074C SEC31P38968 1273 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C YEN1P40028 759 aa2.11□□□□□ -2.07
BRE1YDL074C IES5P40060 125 aa2.11□□□□□ -2.07
BRE1YDL074C ELO3P40319 345 aa2.11□□□□□ -2.07
BRE1YDL074C UFE1P41834 346 aa2.11□□□□□ -2.07
BRE1YDL074C BUD13P46947 266 aaPredicted RBP2.11□□□□□ -2.07
BRE1YDL074C SIP4P46954 829 aa2.11□□□□□ -2.07
BRE1YDL074C ALY2P47029 1046 aa2.11□□□□□ -2.07
BRE1YDL074C MAD3P47074 515 aa2.11□□□□□ -2.07
BRE1YDL074C PRP24P49960 444 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C PSP1P50896 841 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C EFM5P53200 248 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C ASI1P54074 624 aa2.11□□□□□ -2.07
BRE1YDL074C SLG1P54867 378 aa2.11□□□□□ -2.07
BRE1YDL074C LSM3P57743 89 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms