RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W YGL114WP53134 725 aa2.06□□□□□ -2.08
USO1YDL058W CWC24P53769 259 aa2.06□□□□□ -2.08
USO1YDL058W TFB2Q02939 513 aa2.06□□□□□ -2.08
USO1YDL058W ARG7Q04728 441 aa2.06□□□□□ -2.08
USO1YDL058W BSC2Q05611 235 aa2.06□□□□□ -2.08
USO1YDL058W MHR1Q06630 226 aa2.06□□□□□ -2.08
USO1YDL058W VAC14Q06708 880 aa2.06□□□□□ -2.08
USO1YDL058W NOP6Q07623 225 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W CMS1Q07897 291 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W MDM32Q12171 622 aa2.06□□□□□ -2.08
USO1YDL058W TAH18Q12181 623 aa2.06□□□□□ -2.08
USO1YDL058W ERV2Q12284 196 aa2.06□□□□□ -2.08
USO1YDL058W SFG1Q12507 346 aa2.06□□□□□ -2.08
USO1YDL058W WIP1Q2V2P8 89 aa2.06□□□□□ -2.08
USO1YDL058W NUP145P49687 1317 aa2.06□□□□□ -2.08
USO1YDL058W CYB2P00175 591 aa2.06□□□□□ -2.08
USO1YDL058W CCP1P00431 361 aa2.06□□□□□ -2.08
USO1YDL058W MER1P16523 270 aa2.06□□□□□ -2.08
USO1YDL058W EST1P17214 699 aaPredicted RBP2.06□□□□□ -2.08
USO1YDL058W MRPL33P20084 86 aa2.06□□□□□ -2.08
USO1YDL058W PDE1P22434 369 aa2.06□□□□□ -2.08
USO1YDL058W PCL1P24867 279 aa2.06□□□□□ -2.08
USO1YDL058W PLC1P32383 869 aa2.06□□□□□ -2.08
USO1YDL058W CDC12P32468 407 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W SHM2P37291 469 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W ECM2P38241 364 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W CCZ1P38273 704 aa2.06□□□□□ -2.08
USO1YDL058W YMR262WP38430 313 aa2.06□□□□□ -2.08
USO1YDL058W CCC2P38995 1004 aa2.06□□□□□ -2.08
USO1YDL058W CIN4P39110 191 aa2.06□□□□□ -2.08
USO1YDL058W SOP4P39543 234 aaPredicted RBP2.06□□□□□ -2.08
USO1YDL058W MEF2P39677 819 aa2.06□□□□□ -2.08
USO1YDL058W MVP1P40959 511 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W ALD4P46367 519 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W CUE3P53137 624 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W TYW3P53177 273 aa2.06□□□□□ -2.08
USO1YDL058W RBG2P53295 368 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W IMP4P53941 290 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W MRS2Q01926 470 aa2.06□□□□□ -2.08
USO1YDL058W SPP2Q02521 185 aa2.06□□□□□ -2.08
USO1YDL058W ROD1Q02805 837 aa2.06□□□□□ -2.08
USO1YDL058W NHX1Q04121 633 aa2.06□□□□□ -2.08
USO1YDL058W DPL1Q05567 589 aa2.06□□□□□ -2.08
USO1YDL058W RGC1Q06108 1083 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W VPS74Q06385 345 aa2.06□□□□□ -2.08
USO1YDL058W RTT109Q07794 436 aa2.06□□□□□ -2.08
USO1YDL058W REX4Q08237 289 aa2.06□□□□□ -2.08
USO1YDL058W SMF3Q12078 473 aaPredicted RBP2.06□□□□□ -2.08
USO1YDL058W INP53Q12271 1107 aa2.06□□□□□ -2.08
USO1YDL058W MED11Q99278 115 aa2.06□□□□□ -2.08
USO1YDL058W YPK9Q12697 1472 aa2.06□□□□□ -2.08
USO1YDL058W COQ4O13525 335 aa2.06□□□□□ -2.08
USO1YDL058W TDH1P00360 332 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W RPL27AP0C2H6 136 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W RPL27BP0C2H7 136 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W YPK2P18961 677 aa2.06□□□□□ -2.08
USO1YDL058W DAL82P21705 255 aa2.06□□□□□ -2.08
USO1YDL058W TSR4P25040 408 aa2.06□□□□□ -2.08
USO1YDL058W MRM1P25270 412 aa2.06□□□□□ -2.08
USO1YDL058W CDC10P25342 322 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W RAD51P25454 400 aa2.06□□□□□ -2.08
USO1YDL058W RPS5P26783 225 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W FUN26P31381 517 aa2.06□□□□□ -2.08
USO1YDL058W PET127P32606 800 aa2.06□□□□□ -2.08
USO1YDL058W TKL2P33315 681 aa2.06□□□□□ -2.08
USO1YDL058W KTR2P33550 425 aa2.06□□□□□ -2.08
USO1YDL058W HEK2P38199 381 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
USO1YDL058W HSL7P38274 827 aa2.06□□□□□ -2.08
USO1YDL058W SWC5P38326 303 aa2.06□□□□□ -2.08
USO1YDL058W STP2P38704 541 aa2.06□□□□□ -2.08
USO1YDL058W RAD55P38953 406 aa2.06□□□□□ -2.08
USO1YDL058W ILV3P39522 585 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W YER085CP40058 173 aa2.06□□□□□ -2.08
USO1YDL058W YIL161WP40449 235 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W MAM33P40513 266 aa2.06□□□□□ -2.08
USO1YDL058W YFL052WP43551 465 aa2.06□□□□□ -2.08
USO1YDL058W EFM3P47163 339 aa2.06□□□□□ -2.08
USO1YDL058W ESBP6P53918 673 aa2.06□□□□□ -2.08
USO1YDL058W IDP3P53982 420 aaKnown RBP2.06□□□□□ -2.08
USO1YDL058W VPS28Q02767 242 aa2.06□□□□□ -2.08
USO1YDL058W ARO80Q04052 950 aa2.06□□□□□ -2.08
USO1YDL058W ECM18Q04623 453 aa2.06□□□□□ -2.08
USO1YDL058W ENB1Q08299 606 aa2.06□□□□□ -2.08
USO1YDL058W AKR2Q12013 749 aa2.06□□□□□ -2.08
USO1YDL058W RBD2Q12270 262 aa2.06□□□□□ -2.08
USO1YDL058W XRN1P22147 1528 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W RPC40P07703 335 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W DBP1P24784 617 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W VMA5P31412 392 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W HXT3P32466 567 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W ERG1P32476 496 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W SKG6P32900 734 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W UBC6P33296 250 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W TGL1P34163 548 aa2.05□□□□□ -2.08
USO1YDL058W DHR2P36009 735 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W ANR2P36090 516 aaPredicted RBP2.05□□□□□ -2.08
USO1YDL058W CTM1P38818 585 aa2.05□□□□□ -2.08
USO1YDL058W MNN9P39107 395 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W VMA7P39111 118 aa2.05□□□□□ -2.08
USO1YDL058W UBP5P39944 805 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms