RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	FLR1	P38124	548 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	YGL185C	P53100	379 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	YGL138C	P53122	345 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	UBP2	Q01476	1272 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	HAP5	Q02516	242 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	VCX1	Q99385	411 aa		7.17	□□□□□ -1.26
UBP13	YBL067C	BUD14	P27637	709 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	LTV1	P34078	463 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	FSH1	P38777	243 aa	Known RBP	7.16	□□□□□ -1.26
UBP13	YBL067C	MLH1	P38920	769 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	SSP120	P39931	234 aa	Known RBP	7.16	□□□□□ -1.26
UBP13	YBL067C	ALG5	P40350	334 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	YJL171C	P46992	396 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	AQR1	P53943	586 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	MUB1	Q03162	620 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	THI22	Q06490	572 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	BUD7	Q08754	746 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	YIG1	Q08956	461 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	DIF1	O13577	133 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	CKA2	P19454	339 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	ERG1	P32476	496 aa	Known RBP	7.16	□□□□□ -1.26
UBP13	YBL067C	MRPL37	P36532	105 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	MAK5	P38112	773 aa	Predicted RBP	7.16	□□□□□ -1.26
UBP13	YBL067C	VID24	P38263	362 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	MNN9	P39107	395 aa	Known RBP	7.16	□□□□□ -1.26
UBP13	YBL067C	ELO3	P40319	345 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	AAD10	P47182	288 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	FMS1	P50264	508 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	DCP2	P53550	970 aa	Known RBP	7.16	□□□□□ -1.26
UBP13	YBL067C	TRI1	Q05024	226 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	STP3	Q05937	343 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	STE23	Q06010	1027 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	TLG2	Q08144	397 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	HRK1	Q08732	759 aa	Known RBP	7.16	□□□□□ -1.26
UBP13	YBL067C	YPT6	Q99260	215 aa		7.16	□□□□□ -1.26
UBP13	YBL067C	DEP1	P31385	405 aa		7.15	□□□□□ -1.26
UBP13	YBL067C	YKR078W	P36158	585 aa	Known RBP	7.15	□□□□□ -1.26
UBP13	YBL067C	DLD3	P39976	496 aa	Known RBP	7.15	□□□□□ -1.26
UBP13	YBL067C	RTR1	P40084	226 aa	Predicted RBP	7.15	□□□□□ -1.26
UBP13	YBL067C	YJL181W	P46987	611 aa		7.15	□□□□□ -1.26
UBP13	YBL067C	APT1	P49435	187 aa	Known RBP	7.15	□□□□□ -1.26
UBP13	YBL067C	COQ6	P53318	479 aa		7.15	□□□□□ -1.26
UBP13	YBL067C	YNL134C	P53912	376 aa	Known RBP	7.15	□□□□□ -1.26
UBP13	YBL067C	SMA2	Q04658	369 aa		7.15	□□□□□ -1.26
UBP13	YBL067C	YKL070W	P36087	169 aa		7.15	□□□□□ -1.27
UBP13	YBL067C	RRT14	P40470	206 aa		7.15	□□□□□ -1.27
UBP13	YBL067C	RSN1	Q03516	953 aa		7.15	□□□□□ -1.27
UBP13	YBL067C	YLR297W	Q05899	129 aa		7.15	□□□□□ -1.27
UBP13	YBL067C	PRS1	P32895	427 aa	Known RBP	7.14	□□□□□ -1.27
UBP13	YBL067C	PTR2	P32901	601 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	7.14	□□□□□ -1.27	not detected
UBP13	YBL067C	YBL055C	P34220	418 aa	Predicted RBP	7.14	□□□□□ -1.27
UBP13	YBL067C	GLG1	P36143	616 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	YBL029W	P38201	376 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	WSS1	P38838	269 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	KEL1	P38853	1164 aa	Known RBP	7.14	□□□□□ -1.27
UBP13	YBL067C	MND2	P40577	368 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	SMC3	P47037	1230 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	ECM27	P47144	725 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	SQS1	P53866	767 aa	Known RBP	7.14	□□□□□ -1.27
UBP13	YBL067C	YNL144C	P53907	740 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	UTP6	Q02354	440 aa	Known RBP	7.14	□□□□□ -1.27
UBP13	YBL067C	YEH1	Q07804	573 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	SMC5	Q08204	1093 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	TRE1	Q08919	783 aa		7.14	□□□□□ -1.27
UBP13	YBL067C	SSK22	P25390	1331 aa	Predicted RBP	7.14	□□□□□ -1.27
UBP13	YBL067C	PCK1	P10963	549 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	RPI1	P23250	407 aa	Known RBP	7.13	□□□□□ -1.27
UBP13	YBL067C	PAT1	P25644	796 aa	Known RBP	7.13	□□□□□ -1.27
UBP13	YBL067C	FAA1	P30624	700 aa	Known RBP	7.13	□□□□□ -1.27
UBP13	YBL067C	BZZ1	P38822	633 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	ASG1	P40467	964 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	YMR102C	Q03177	834 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	YLL007C	Q07799	665 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	FMP40	Q08968	688 aa	Predicted RBP	7.13	□□□□□ -1.27
UBP13	YBL067C	FUS3	P16892	353 aa	Known RBP	7.13	□□□□□ -1.27
UBP13	YBL067C	VPS33	P20795	691 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	PMT1	P33775	817 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	MRPL36	P36531	177 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	PEF1	P53238	335 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	SRT1	Q03175	343 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	ADY4	Q05955	493 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	TSR1	Q07381	788 aa	Known RBP	7.13	□□□□□ -1.27
UBP13	YBL067C	ACM1	Q08981	209 aa		7.13	□□□□□ -1.27
UBP13	YBL067C	HXT1	P32465	570 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	YFR018C	P43599	363 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	DLD2	P46681	530 aa	Known RBP	7.12	□□□□□ -1.27
UBP13	YBL067C	NOG2	P53742	486 aa	Known RBP	7.12	□□□□□ -1.27
UBP13	YBL067C	LOT6	Q07923	191 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	DCI1	Q08558	271 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	SLK19	Q08581	821 aa	Known RBP	7.12	□□□□□ -1.27
UBP13	YBL067C	YOR022C	Q12204	715 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	GPR1	Q12361	961 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	CDC4	P07834	779 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	SYN8	P31377	255 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	ADE17	P38009	592 aa	Known RBP	7.12	□□□□□ -1.27
UBP13	YBL067C	REV7	P38927	245 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	YIR007W	P40566	764 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	YDL183C	P48569	320 aa		7.12	□□□□□ -1.27
UBP13	YBL067C	MCM6	P53091	1017 aa	Known RBP	7.12	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms