RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 VPS53Q5VIR6 699 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 ZNF444Q8N0Y2 327 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-231ENST00000641939 LPAR1Q92633 364 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 PLXNB2O15031 1838 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 PEX10O60683 326 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 PRDM1O75626 825 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 PDE4AP27815 886 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 GRK4P32298 578 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 FLT3LGP49771 235 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 ERVK-9P63128 1117 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 ERVK-24P63145 666 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 MLLT1Q03111 559 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-231ENST00000641939 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 POTEEQ6S8J3 1075 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 LBX2Q6XYB7 198 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 PAGR1Q9BTK6 254 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 RABGAP1Q9Y3P9 1069 aa17.9■□□□□ 0.46
PHGDH-231ENST00000641939 ALX1Q15699 326 aa17.89■□□□□ 0.45
PHGDH-231ENST00000641939 Q3C1V9 767 aa17.89■□□□□ 0.45
PHGDH-231ENST00000641939 ZNF589Q86UQ0 364 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-231ENST00000641939 SPICE1Q8N0Z3 855 aa17.89■□□□□ 0.45
PHGDH-231ENST00000641939 SLAIN1Q8ND83 568 aa17.89■□□□□ 0.45
PHGDH-231ENST00000641939 TANGO6Q9C0B7 1094 aa17.89■□□□□ 0.45
PHGDH-231ENST00000641939 CCDC171Q6TFL3 1326 aa17.89■□□□□ 0.45
PHGDH-231ENST00000641939 SPDYE16A6NNV3 312 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-231ENST00000641939 HIP1O00291 1037 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 ADCY3O60266 1144 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 CNMDO75829 334 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 IRF5Q13568 498 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 COG2Q14746 738 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 TMEM106CQ9BVX2 250 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 HOXC10Q9NYD6 342 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 NYAP2Q9P242 653 aa17.88■□□□□ 0.45
PHGDH-231ENST00000641939 A0A0G2JMZ2 1700 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 IGKV6D-41A0A0C4DH26 115 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 POTEFA5A3E0 1075 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 WDR46O15213 610 aaKnown RBP17.87■□□□□ 0.45
PHGDH-231ENST00000641939 HSPD1P10809 573 aaKnown RBP17.87■□□□□ 0.45
PHGDH-231ENST00000641939 MAPK4P31152 587 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 MFAP1P55081 439 aaKnown RBP17.87■□□□□ 0.45
PHGDH-231ENST00000641939 CCAR1Q8IX12 1150 aaKnown RBP17.87■□□□□ 0.45
PHGDH-231ENST00000641939 DIAPH3Q9NSV4 1193 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 BIN2Q9UBW5 565 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-231ENST00000641939 ANAPC4Q9UJX5 808 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 GJD2Q9UKL4 321 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 ZMYM6O95789 1325 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 PLIN4Q96Q06 1357 aa17.87■□□□□ 0.45
PHGDH-231ENST00000641939 COL11A1P12107 1806 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-231ENST00000641939 TNRC18O15417 2968 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-231ENST00000641939 FLOT1O75955 427 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 MYCP01106 439 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-231ENST00000641939 FGAP02671 866 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 TSPY3P0CV98 308 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 TSPY8P0CW00 308 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 CCNA1P78396 465 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 CTDSPL2Q05D32 466 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 TTC22Q5TAA0 569 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 NEDD1Q8NHV4 660 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 PXYLP1Q8TE99 480 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 CEP95Q96GE4 821 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 PORCNQ9H237 461 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 BTBD7Q9P203 1132 aa17.86■□□□□ 0.45
PHGDH-231ENST00000641939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.86■□□□□ 0.45
PHGDH-231ENST00000641939 RAD21O60216 631 aa17.85■□□□□ 0.45
PHGDH-231ENST00000641939 DSG3P32926 999 aa17.85■□□□□ 0.45
PHGDH-231ENST00000641939 UBXN2AP68543 259 aa17.85■□□□□ 0.45
PHGDH-231ENST00000641939 TFAP4Q01664 338 aa17.85■□□□□ 0.45
PHGDH-231ENST00000641939 FAM47AQ5JRC9 791 aa17.85■□□□□ 0.45
PHGDH-231ENST00000641939 CWC27Q6UX04 472 aaKnown RBP17.85■□□□□ 0.45
PHGDH-231ENST00000641939 MTMR4Q9NYA4 1195 aa17.85■□□□□ 0.45
PHGDH-231ENST00000641939 CLIP2Q9UDT6 1046 aa17.85■□□□□ 0.45
PHGDH-231ENST00000641939 MKI67P46013 3256 aaKnown RBP17.85■□□□□ 0.45
PHGDH-231ENST00000641939 LAMA4Q16363 1823 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 TTLL1O95922 423 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 GSPT1P15170 499 aaKnown RBP17.84■□□□□ 0.45
PHGDH-231ENST00000641939 ELNP15502 786 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 MTFR1Q15390 333 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 GPR142Q7Z601 462 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 PLEKHH3Q7Z736 793 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 MB21D1Q8N884 522 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 MKL1Q969V6 931 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 NUDT12Q9BQG2 462 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 CWC22Q9HCG8 908 aaKnown RBP17.84■□□□□ 0.45
PHGDH-231ENST00000641939 INCENPQ9NQS7 918 aa17.84■□□□□ 0.45
PHGDH-231ENST00000641939 FAM83BQ5T0W9 1011 aa17.83■□□□□ 0.44
PHGDH-231ENST00000641939 SOCS4Q8WXH5 440 aa17.83■□□□□ 0.44
PHGDH-231ENST00000641939 SYNPO2Q9UMS6 1093 aa17.83■□□□□ 0.44
PHGDH-231ENST00000641939 ZNFX1Q9P2E3 1918 aaKnown RBP17.82■□□□□ 0.44
PHGDH-231ENST00000641939 TSPY2A6NKD2 308 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 F5H6K3 240 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 ORC4O43929 436 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 NDUFB10O96000 172 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 INHAP05111 366 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 FGRP09769 529 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 CCL5P13501 91 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 EN2P19622 333 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-231ENST00000641939 KLRC3Q07444 240 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms