RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 FAM192AQ9GZU8 254 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 USP19O94966 1318 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 SLC27A2O14975 620 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 HARSP12081 509 aaKnown RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 LMNB1P20700 586 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 PREPLQ4J6C6 727 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 NAIF1Q69YI7 327 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 SELENOSQ9BQE4 189 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 TM6SF1Q9BZW5 370 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 BHMT2Q9H2M3 363 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 RNF41Q9H4P4 317 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-227ENST00000640648 RMI1Q9H9A7 625 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 NUB1Q9Y5A7 615 aa9.14□□□□□ -0.95
NECAP1-227ENST00000640648 ESRRGP62508 458 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 ST5P78524 1137 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 KLC1Q07866 573 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 AKAP4Q5JQC9 854 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 SLC9C2Q5TAH2 1124 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-227ENST00000640648 NFATC2IPQ8NCF5 419 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 FAM81AQ8TBF8 368 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 SGSM3Q96HU1 749 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 DRC3Q9H069 523 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 EIF4G3O43432 1585 aaKnown RBP9.13□□□□□ -0.95
NECAP1-227ENST00000640648 ABCC4O15439 1325 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 KDM5DQ9BY66 1539 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 TRIM66O15016 1216 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 ASXL2Q76L83 1435 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 YTHDF3Q7Z739 585 aaKnown RBP9.13□□□□□ -0.95
NECAP1-227ENST00000640648 B4GALNT2Q8NHY0 566 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 UNC45AQ9H3U1 944 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 LZTFL1Q9NQ48 299 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 ZC4H2Q9NQZ6 224 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 NUTM2BA6NNL0 878 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-227ENST00000640648 NUTM2EB1AL46 878 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-227ENST00000640648 ATP2A1O14983 1001 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 JAK2O60674 1132 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 TIMM10P62072 90 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 PSMC1P62191 440 aaKnown RBP9.13□□□□□ -0.95
NECAP1-227ENST00000640648 NNTQ13423 1086 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 CUL4AQ13619 759 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 INF2Q27J81 1249 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 PAPOLBQ9NRJ5 636 aaKnown RBP9.13□□□□□ -0.95
NECAP1-227ENST00000640648 FGFR1OP2Q9NVK5 253 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 WWC3Q9ULE0 1092 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 ANKRD62A6NC57 917 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 RPS6KB1P23443 525 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 UBA7P41226 1012 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 PDE1BQ01064 536 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 E2F5Q15329 346 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 CAVIN4Q5BKX8 364 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 TRIML1Q8N9V2 468 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 CCDC28BQ9BUN5 200 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 SYNCQ9H7C4 482 aa9.13□□□□□ -0.95
NECAP1-227ENST00000640648 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 AKR1B10O60218 316 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 ATP2A2P16615 1042 aaKnown RBP9.12□□□□□ -0.95
NECAP1-227ENST00000640648 GJA8P48165 433 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 RAB15P59190 212 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 SCRN1Q12765 414 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 WTAPQ15007 396 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 DHX58Q96C10 678 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 RAB17Q9H0T7 212 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 GSTA1P08263 222 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 CUL4BQ13620 913 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 RRAGBQ5VZM2 374 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 HIBCHQ6NVY1 386 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-227ENST00000640648 VPS52Q8N1B4 723 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 RNF217Q8TC41 542 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 KLHL29Q96CT2 875 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 EDC3Q96F86 508 aaKnown RBP9.12□□□□□ -0.95
NECAP1-227ENST00000640648 RUNDC3BQ96NL0 473 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 L2HGDHQ9H9P8 463 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 GSCP56915 257 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-227ENST00000640648 CCDC122Q5T0U0 273 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 ATP6V0A1Q93050 837 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 RGS12O14924 1447 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 IL15P40933 162 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-227ENST00000640648 AMPD3Q01432 767 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 ZSCAN29Q8IWY8 852 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-227ENST00000640648 CCDC42Q96M95 316 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 DBNDD2Q9BQY9 259 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 VAT1LQ9HCJ6 419 aa9.12□□□□□ -0.95
NECAP1-227ENST00000640648 KDM1AO60341 852 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 TTF1Q15361 905 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-227ENST00000640648 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 MAP7D3Q8IWC1 876 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 TRIM47Q96LD4 638 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 ANKRD2Q9GZV1 360 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 LGR6Q9HBX8 967 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 ZNF518AQ6AHZ1 1483 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 GSTTP1A0A1W2PQM5 241 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 OPHN1O60890 802 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 LRMPQ12912 555 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 ADRM1Q16186 407 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 RTN1Q16799 776 aa9.11□□□□□ -0.95
NECAP1-227ENST00000640648 VWA3BQ502W6 1294 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms