RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 USP48Q86UV5 1035 aa13.08□□□□□ -0.32
LINC02001-202ENST00000638682 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
LINC02001-202ENST00000638682 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.32
LINC02001-202ENST00000638682 ZNF408Q9H9D4 720 aa13.08□□□□□ -0.32
LINC02001-202ENST00000638682 PITPNM2Q9BZ72 1349 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 CCDC69A6NI79 296 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 WNT10BO00744 389 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 CTDNEP1O95476 244 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 PDCP20941 246 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 RBM5P52756 815 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC02001-202ENST00000638682 PICALMQ13492 652 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 APOBEC3HQ6NTF7 200 aaKnown RBP13.07□□□□□ -0.32
LINC02001-202ENST00000638682 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 CLEC17AQ6ZS10 378 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
LINC02001-202ENST00000638682 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 SERPINA10Q9UK55 444 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 TNKSO95271 1327 aa13.07□□□□□ -0.32
LINC02001-202ENST00000638682 SIPA1L1O43166 1804 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 PTPDC1A2A3K4 754 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 ZBTB43O43298 467 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 DHX16O60231 1041 aaKnown RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 CELF2O95319 508 aaKnown RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 ZSCAN22P10073 491 aaPredicted RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 NT5C2P49902 561 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 PLCD1P51178 756 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 SEC23AQ15436 765 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 IQCA1Q86XH1 822 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 ZSCAN10Q96SZ4 725 aaPredicted RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 ABT1Q9ULW3 272 aaKnown RBP13.06□□□□□ -0.32
LINC02001-202ENST00000638682 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 SLC12A7Q9Y666 1083 aa13.06□□□□□ -0.32
LINC02001-202ENST00000638682 GOLGA8AA7E2F4 631 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 MYO1BO43795 1136 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC02001-202ENST00000638682 FAM47AQ5JRC9 791 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 MICU3Q86XE3 530 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 APOBEC3FQ8IUX4 373 aaKnown RBP13.05□□□□□ -0.32
LINC02001-202ENST00000638682 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
LINC02001-202ENST00000638682 FAM184AQ8NB25 1140 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 MKNK2Q9HBH9 465 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 DDX4Q9NQI0 724 aaKnown RBP13.05□□□□□ -0.32
LINC02001-202ENST00000638682 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 TRPM7Q96QT4 1865 aa13.05□□□□□ -0.32
LINC02001-202ENST00000638682 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
LINC02001-202ENST00000638682 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 CPLX1O14810 134 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
LINC02001-202ENST00000638682 RXRAP19793 462 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 ZNF454Q8N9F8 522 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 ZNF287Q9HBT7 754 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 NID2Q14112 1375 aa13.04□□□□□ -0.32
LINC02001-202ENST00000638682 F13A1P00488 732 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 TFAP4Q01664 338 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 IFIT1BQ5T764 474 aaKnown RBP13.03□□□□□ -0.32
LINC02001-202ENST00000638682 TTC6Q86TZ1 520 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 ZNF444Q8N0Y2 327 aaPredicted RBP13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CDCA5Q96FF9 252 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
LINC02001-202ENST00000638682 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
LINC02001-202ENST00000638682 SCAF8Q9UPN6 1271 aaKnown RBP13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CNTNAP1P78357 1384 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 NMT2O60551 498 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CDKL5O76039 1030 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CDK8P49336 464 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 RCAN1P53805 252 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CACNB3P54284 484 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 NFIAQ12857 509 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CST9Q5W186 159 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
LINC02001-202ENST00000638682 DLK2Q6UY11 383 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 SLC4A5Q9BY07 1137 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 VEZTQ9HBM0 779 aa13.03□□□□□ -0.32
LINC02001-202ENST00000638682 MYH4Q9Y623 1939 aa13.02□□□□□ -0.32
LINC02001-202ENST00000638682 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
LINC02001-202ENST00000638682 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
LINC02001-202ENST00000638682 RASA1P20936 1047 aa13.02□□□□□ -0.33
LINC02001-202ENST00000638682 CDC27P30260 824 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms