RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 SHCBP1Q8NEM2 672 aa21.6■■□□□ 1.05
CIITA-215ENST00000637439 NPLOC4Q8TAT6 608 aa21.6■■□□□ 1.05
CIITA-215ENST00000637439 ZNF236Q9UL36 1845 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 A0A1W2PRG0 241 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 RAB11FIP3O75154 756 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 OLFML2BQ68BL8 750 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 LCORLQ8N3X6 602 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 SDR42E1Q8WUS8 393 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 MOV10L1Q9BXT6 1211 aaKnown RBP21.59■■□□□ 1.05
CIITA-215ENST00000637439 SENP6Q9GZR1 1112 aaPredicted RBP21.59■■□□□ 1.05
CIITA-215ENST00000637439 SH2D4AQ9H788 454 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 ARHGEF10LQ9HCE6 1279 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 ATP8A2Q9NTI2 1148 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 SLC5A4Q9NY91 659 aa21.59■■□□□ 1.05
CIITA-215ENST00000637439 ZBED9Q6R2W3 1325 aa21.58■■□□□ 1.05
CIITA-215ENST00000637439 COL6A3P12111 3177 aa21.58■■□□□ 1.05
CIITA-215ENST00000637439 APBB1O00213 710 aa21.58■■□□□ 1.05
CIITA-215ENST00000637439 DNM1LO00429 736 aa21.58■■□□□ 1.05
CIITA-215ENST00000637439 CYP2C19P33261 490 aa21.58■■□□□ 1.05
CIITA-215ENST00000637439 SPATC1LQ9H0A9 340 aa21.58■■□□□ 1.05
CIITA-215ENST00000637439 DDX19BQ9UMR2 479 aa21.58■■□□□ 1.05
CIITA-215ENST00000637439 MYH8P13535 1937 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 IGHA2P01877 340 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 CYBAP13498 195 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 ADORA2AP29274 412 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 AMOTL1Q8IY63 956 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 ARRDC4Q8NCT1 418 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 CCDC17Q96LX7 622 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 LBHD1Q9BQE6 289 aaPredicted RBP21.57■■□□□ 1.04
CIITA-215ENST00000637439 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.57■■□□□ 1.04
CIITA-215ENST00000637439 CHMP4BQ9H444 224 aaKnown RBP21.57■■□□□ 1.04
CIITA-215ENST00000637439 MROH8Q9H579 483 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 PAG1Q9NWQ8 432 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 DNAH12Q6ZR08 3092 aa21.57■■□□□ 1.04
CIITA-215ENST00000637439 A0A0G2JMZ2 1700 aa21.56■■□□□ 1.04
CIITA-215ENST00000637439 ERCC3P19447 782 aa21.56■■□□□ 1.04
CIITA-215ENST00000637439 MDM2Q00987 491 aaPredicted RBP21.56■■□□□ 1.04
CIITA-215ENST00000637439 EVX2Q03828 476 aa21.56■■□□□ 1.04
CIITA-215ENST00000637439 ABRAQ8N0Z2 381 aa21.56■■□□□ 1.04
CIITA-215ENST00000637439 ARMT1Q9H993 441 aa21.56■■□□□ 1.04
CIITA-215ENST00000637439 TMX2Q9Y320 296 aa21.56■■□□□ 1.04
CIITA-215ENST00000637439 CYP2D6P10635 497 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 DSG3P32926 999 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 ADD2P35612 726 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 SLC44A5Q8NCS7 719 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 TRPV1Q8NER1 839 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 DDRGK1Q96HY6 314 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 PRKAG2Q9UGJ0 569 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 RLFQ13129 1914 aa21.55■■□□□ 1.04
CIITA-215ENST00000637439 DLL1O00548 723 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 FLOT1O75955 427 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 ATP5JP18859 108 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 ICA1Q05084 483 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 PLS1Q14651 629 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 MIER1Q8N108 512 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 DYNLL2Q96FJ2 89 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 VCPKMTQ9H867 229 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 ZBTB40Q9NUA8 1239 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 STXBP5LQ9Y2K9 1186 aa21.54■■□□□ 1.04
CIITA-215ENST00000637439 KBTBD13C9JR72 458 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 WDR46O15213 610 aaKnown RBP21.53■■□□□ 1.04
CIITA-215ENST00000637439 SEPT4O43236 478 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 MBD4O95243 580 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 Q7L0L9 218 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 NCAPG2Q86XI2 1143 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 BOLA2Q9H3K6 86 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 MTMR10Q9NXD2 777 aa21.53■■□□□ 1.04
CIITA-215ENST00000637439 PRKAB2O43741 272 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 SLC25A27O95847 323 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 AKR1B1P15121 316 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 ATN1P54259 1190 aaPredicted RBP21.52■■□□□ 1.04
CIITA-215ENST00000637439 KIAA1755Q5JYT7 1200 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 C12orf60Q5U649 245 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 SIAH1Q8IUQ4 282 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 SIRT2Q8IXJ6 389 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 HAUS7Q99871 368 aa21.52■■□□□ 1.04
CIITA-215ENST00000637439 COBLO75128 1261 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 FCER1AP12319 257 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 CDK8P49336 464 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 RTP1P59025 263 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 UBE3CQ15386 1083 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 GJC2Q5T442 439 aaPredicted RBP21.51■■□□□ 1.03
CIITA-215ENST00000637439 ZSCAN25Q6NSZ9 544 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 SPICE1Q8N0Z3 855 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 ATG4CQ96DT6 458 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
CIITA-215ENST00000637439 BAZ2AQ9UIF9 1905 aaKnown RBP21.51■■□□□ 1.03
CIITA-215ENST00000637439 USP17L12C9JPN9 530 aa21.5■■□□□ 1.03
CIITA-215ENST00000637439 USP17L21D6R901 530 aa21.5■■□□□ 1.03
CIITA-215ENST00000637439 C16orf86Q6ZW13 317 aa21.5■■□□□ 1.03
CIITA-215ENST00000637439 KANSL2Q9H9L4 492 aa21.5■■□□□ 1.03
CIITA-215ENST00000637439 FAM109BQ6ICB4 259 aaPredicted RBP21.49■■□□□ 1.03
CIITA-215ENST00000637439 SLC39A5Q6ZMH5 540 aa21.49■■□□□ 1.03
CIITA-215ENST00000637439 CLEC10AQ8IUN9 316 aa21.49■■□□□ 1.03
CIITA-215ENST00000637439 MAML3Q96JK9 1138 aa21.49■■□□□ 1.03
CIITA-215ENST00000637439 GOPCQ9HD26 462 aa21.49■■□□□ 1.03
CIITA-215ENST00000637439 NRBP1Q9UHY1 535 aa21.49■■□□□ 1.03
CIITA-215ENST00000637439 ATP11BQ9Y2G3 1177 aa21.49■■□□□ 1.03
CIITA-215ENST00000637439 MYH7P12883 1935 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms