RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 SMTNP53814 917 aa13.94□□□□□ -0.18
CHRNA7-225ENST00000637189 HAUS3Q68CZ6 603 aa13.94□□□□□ -0.18
CHRNA7-225ENST00000637189 USP6NLQ92738 828 aa13.94□□□□□ -0.18
CHRNA7-225ENST00000637189 SLF1Q9BQI6 1058 aa13.94□□□□□ -0.18
CHRNA7-225ENST00000637189 TOM1O60784 492 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 TBC1D8O95759 1140 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 TAOK1Q7L7X3 1001 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 SPATS2Q86XZ4 545 aaKnown RBP13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 CCDC117Q8IWD4 279 aaPredicted RBP13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 I3L4J1 428 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 STAMQ92783 540 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 C19orf44Q9H6X5 657 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 A1BGP04217 495 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 MYCLP12524 364 aaPredicted RBP13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 MTX1Q13505 466 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 ARMC9Q7Z3E5 817 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 VPS37BQ9H9H4 285 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
CHRNA7-225ENST00000637189 CCT5P48643 541 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 KRT40Q6A162 431 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 GJA3Q9Y6H8 435 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 KCNA6P17658 529 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 POSTNQ15063 836 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 TRMT44Q8IYL2 757 aaKnown RBP13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 SH2D4AQ9H788 454 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 AOX1Q06278 1338 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 HINFPQ9BQA5 517 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 MRPL46Q9H2W6 279 aaKnown RBP13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 CUL4BQ13620 913 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 USH1GQ495M9 461 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 NELFCDQ8IXH7 590 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 ZKSCAN8Q15776 578 aaPredicted RBP13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 KBTBD3Q8NAB2 608 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 MLKLQ8NB16 471 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 NELFBQ8WX92 580 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 VCX3AQ9NNX9 186 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 NFE2L3Q9Y4A8 694 aa13.92□□□□□ -0.18
CHRNA7-225ENST00000637189 ARHGAP42A6NI28 874 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ZAP70P43403 619 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 LIN9Q5TKA1 542 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ARHGEF35A5YM69 484 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 A6NNZ2 444 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ATP1A2P50993 1020 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ADCY7P51828 1080 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 TUBB8Q3ZCM7 444 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 CAPN12Q6ZSI9 719 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ZNF532Q9HCE3 1301 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 CREB3O43889 395 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 TRPC3Q13507 836 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 KRT71Q3SY84 523 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 SLC9C1Q4G0N8 1177 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ARHGEF10LQ9HCE6 1279 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 NUP153P49790 1475 aaKnown RBP13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 STRN3Q13033 797 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 PNOCQ13519 176 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ARHGAP24Q8N264 748 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 SPATA5Q8NB90 893 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 RAB3IPQ96QF0 476 aaPredicted RBP13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 hCG_2014768A0A024R1R8 64 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 PER1O15534 1290 aaPredicted RBP13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 NONOQ15233 471 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 PARP10Q53GL7 1025 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 HERC4Q5GLZ8 1057 aaPredicted RBP13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ANKRD20A3Q5VUR7 823 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 ICE2Q659A1 982 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 RUFY4Q6ZNE9 571 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 TSC22D3Q99576 134 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 GGA1Q9UJY5 639 aa13.91□□□□□ -0.18
CHRNA7-225ENST00000637189 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 KDM2BQ8NHM5 1336 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 ANLNQ9NQW6 1124 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 NUP58Q9BVL2 599 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 MAGEA1P43355 309 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 LRMPQ12912 555 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 MCTP2Q6DN12 878 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 YY1AP1Q9H869 796 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 PALMDQ9NP74 551 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 CCNL1Q9UK58 526 aaPredicted RBP13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 SKOR1P84550 965 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 CALCRLQ16602 461 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 DCUN1D2Q6PH85 259 aa13.9□□□□□ -0.18
CHRNA7-225ENST00000637189 MYCT1Q8N699 235 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms