RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ALPK3Q96L96 1907 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 SPDYE16A6NNV3 312 aaPredicted RBP15.17■□□□□ 0.02
CTSD-208ENST00000636843 COL6A1P12109 1028 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 GRB14Q14449 540 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 SMC5Q8IY18 1101 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 DCP1AQ9NPI6 582 aaPredicted RBP15.17■□□□□ 0.02
CTSD-208ENST00000636843 HOXC10Q9NYD6 342 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 BTBD7Q9P203 1132 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
CTSD-208ENST00000636843 APBB1O00213 710 aa15.16■□□□□ 0.02
CTSD-208ENST00000636843 MPHOSPH10O00566 681 aaKnown RBP15.16■□□□□ 0.02
CTSD-208ENST00000636843 ATP2B2Q01814 1243 aa15.16■□□□□ 0.02
CTSD-208ENST00000636843 COG2Q14746 738 aa15.16■□□□□ 0.02
CTSD-208ENST00000636843 TMEM179Q6ZVK1 233 aa15.16■□□□□ 0.02
CTSD-208ENST00000636843 DDX60LQ5H9U9 1706 aaKnown RBP15.15■□□□□ 0.02
CTSD-208ENST00000636843 SOX1O00570 391 aaPredicted RBP15.15■□□□□ 0.02
CTSD-208ENST00000636843 SIRT2Q8IXJ6 389 aa15.15■□□□□ 0.02
CTSD-208ENST00000636843 LCORLQ8N3X6 602 aa15.15■□□□□ 0.02
CTSD-208ENST00000636843 SDR42E1Q8WUS8 393 aa15.15■□□□□ 0.02
CTSD-208ENST00000636843 A0A1W2PRG0 241 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 STRNO43815 780 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 MSCO60682 206 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 SYN1P17600 705 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 MAGEA10P43363 369 aaPredicted RBP15.14■□□□□ 0.01
CTSD-208ENST00000636843 GPR153Q6NV75 609 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 MB21D1Q8N884 522 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 ATP8A2Q9NTI2 1148 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 PAG1Q9NWQ8 432 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 FLRT1Q9NZU1 646 aa15.14■□□□□ 0.01
CTSD-208ENST00000636843 ATP5JP18859 108 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 ADD2P35612 726 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 EVX2Q03828 476 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 SHCBP1Q8NEM2 672 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 NPLOC4Q8TAT6 608 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 LPAR1Q92633 364 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 DDRGK1Q96HY6 314 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 LRCH3Q96II8 777 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 CCDC17Q96LX7 622 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 ANP32EQ9BTT0 268 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 MOV10L1Q9BXT6 1211 aaKnown RBP15.13■□□□□ 0.01
CTSD-208ENST00000636843 TANGO6Q9C0B7 1094 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.012e-6■■■□□ 17.7
CTSD-208ENST00000636843 BOLA2Q9H3K6 86 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 ARMT1Q9H993 441 aa15.13■□□□□ 0.01
CTSD-208ENST00000636843 DDX20Q9UHI6 824 aaKnown RBP15.13■□□□□ 0.01
CTSD-208ENST00000636843 CYP2D6P10635 497 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 LRRC26Q2I0M4 334 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 DPP9Q86TI2 863 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 SLC44A5Q8NCS7 719 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 HAUS7Q99871 368 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 SPATC1LQ9H0A9 340 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 SH2D4AQ9H788 454 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 ARHGEF10LQ9HCE6 1279 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 MBD4O95243 580 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 IGHA2P01877 340 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 CNGA1P29973 690 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 OLFML2BQ68BL8 750 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 AMOTL1Q8IY63 956 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 TDHQ8IZJ6 230 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 DYNLL2Q96FJ2 89 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 UBE2OQ9C0C9 1292 aaKnown RBP15.12■□□□□ 0.01
CTSD-208ENST00000636843 BCL11AQ9H165 835 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
CTSD-208ENST00000636843 TMX2Q9Y320 296 aa15.12■□□□□ 0.01
CTSD-208ENST00000636843 PRKAB2O43741 272 aa15.11■□□□□ 0.01
CTSD-208ENST00000636843 ADORA2AP29274 412 aa15.11■□□□□ 0.01
CTSD-208ENST00000636843 DSG3P32926 999 aa15.11■□□□□ 0.01
CTSD-208ENST00000636843 CYP2C19P33261 490 aa15.11■□□□□ 0.01
CTSD-208ENST00000636843 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
CTSD-208ENST00000636843 C12orf60Q5U649 245 aa15.11■□□□□ 0.01
CTSD-208ENST00000636843 SLC5A4Q9NY91 659 aa15.11■□□□□ 0.01
CTSD-208ENST00000636843 CYBAP13498 195 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 AKR1B1P15121 316 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 ERCC3P19447 782 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 CDK8P49336 464 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 ICA1Q05084 483 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 KIAA1755Q5JYT7 1200 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 SIAH1Q8IUQ4 282 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 ABRAQ8N0Z2 381 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 SENP6Q9GZR1 1112 aaPredicted RBP15.1■□□□□ 0.01
CTSD-208ENST00000636843 MROH8Q9H579 483 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 VCPKMTQ9H867 229 aa15.1■□□□□ 0.01
CTSD-208ENST00000636843 LAMA3Q16787 3333 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 USP17L12C9JPN9 530 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 USP17L21D6R901 530 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 DNM1LO00429 736 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 WDR46O15213 610 aaKnown RBP15.09■□□□□ 0.01
CTSD-208ENST00000636843 FLOT1O75955 427 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 NUCB1Q02818 461 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 ZSCAN25Q6NSZ9 544 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 C16orf86Q6ZW13 317 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 ARRDC4Q8NCT1 418 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 TRPV1Q8NER1 839 aa15.09■□□□□ 0.01
CTSD-208ENST00000636843 PLS1Q14651 629 aa15.08■□□□□ 0.01
CTSD-208ENST00000636843 NCAPG2Q86XI2 1143 aa15.08■□□□□ 0.01
CTSD-208ENST00000636843 SPICE1Q8N0Z3 855 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms