RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FERMT2Q96AC1 680 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 ZDHHC15Q96MV8 337 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 NAT10Q9H0A0 1025 aaKnown RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 USP40Q9NVE5 1235 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 VPS54Q9P1Q0 977 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 SWAP70Q9UH65 585 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 SAP30BPQ9UHR5 308 aaKnown RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 MAD2L2Q9UI95 211 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 TUBE1Q9UJT0 475 aa6.39□□□□□ -1.39
NEK3-211ENST00000629912 FBXO2Q9UK22 296 aaPredicted RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 TTF2Q9UNY4 1162 aaKnown RBP6.39□□□□□ -1.39
NEK3-211ENST00000629912 IGKV6D-41A0A0C4DH26 115 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 NLRP5P59047 1200 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 MDM2Q00987 491 aaPredicted RBP6.38□□□□□ -1.39
NEK3-211ENST00000629912 EN1Q05925 392 aaPredicted RBP6.38□□□□□ -1.39
NEK3-211ENST00000629912 PPP4R3BQ5MIZ7 849 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 DACT2Q5SW24 774 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 CDC42EP5Q6NZY7 148 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 SARM1Q6SZW1 724 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 OLFM4Q6UX06 510 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 KRBA2Q6ZNG9 492 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.38□□□□□ -1.39
NEK3-211ENST00000629912 LUZP1Q86V48 1076 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 DAGLBQ8NCG7 672 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 SLC44A5Q8NCS7 719 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 SLC16A10Q8TF71 515 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 CLIC6Q96NY7 704 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 SPZ1Q9BXG8 430 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 IDI2Q9BXS1 227 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 DNAJC25Q9H1X3 360 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 EHD4Q9H223 541 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 VPS33BQ9H267 617 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 FAM13BQ9NYF5 915 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.38□□□□□ -1.39
NEK3-211ENST00000629912 HOOK1Q9UJC3 728 aaKnown RBP6.38□□□□□ -1.39
NEK3-211ENST00000629912 KCNH3Q9ULD8 1083 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 PCDHA4Q9UN74 947 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 ZKSCAN5Q9Y2L8 839 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 PCDHB6Q9Y5E3 794 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 PLIN4Q96Q06 1357 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 MYH8P13535 1937 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 EP400Q96L91 3159 aa6.38□□□□□ -1.39
NEK3-211ENST00000629912 ZNF646O15015 1829 aaPredicted RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 C10orf71Q711Q0 1435 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 SNED1Q8TER0 1413 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 SMTNL1A8MU46 457 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 GOLGA6L6A8MZA4 724 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 KLRF2D3W0D1 207 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 M0R2N6 131 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 CYTH3O43739 400 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 PARP1P09874 1014 aaKnown RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 VEGFAP15692 232 aaPredicted RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 CDC25BP30305 580 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 CRKP46108 304 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 ZNF75DP51815 510 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 KIAA2012Q0VF49 1180 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 SLC35G1Q2M3R5 365 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 LONRF3Q496Y0 759 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 EARS2Q5JPH6 523 aaKnown RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 CT47A1Q5JQC4 288 aaPredicted RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 NT5DC1Q5TFE4 455 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 METTL16Q86W50 562 aaKnown RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 PLA2G4DQ86XP0 818 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 FOXP4Q8IVH2 680 aaPredicted RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 DHX40Q8IX18 779 aaKnown RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 CEP57L1Q8IYX8 460 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 BLIDQ8IZY5 108 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 STAG2Q8N3U4 1231 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 MKL1Q969V6 931 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 CCDC17Q96LX7 622 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 OSBPL5Q9H0X9 879 aaPredicted RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 DHX36Q9H2U1 1008 aaKnown RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 RIOX1Q9H6W3 641 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 ANO8Q9HCE9 1232 aaPredicted RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 DDX4Q9NQI0 724 aaKnown RBP6.37□□□□□ -1.39
NEK3-211ENST00000629912 BARHL2Q9NY43 387 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 MTMR4Q9NYA4 1195 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 SERPINB13Q9UIV8 391 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 SERPINA10Q9UK55 444 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 SCN9AQ15858 1988 aa6.37□□□□□ -1.39
NEK3-211ENST00000629912 hCG_1642624A0A1W2PR95 340 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 BECN2A8MW95 431 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 F8W031 263 aaPredicted RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 GOLGA6L19H0YKK7 550 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 hCG_1984214I3L0E3 225 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 STXBP3O00186 592 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 IKBKBO14920 756 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 MYO1BO43795 1136 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 ECE2O60344 883 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 HLA-DOAP06340 250 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 PTMAP06454 111 aaKnown RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 SNHG28P0DPA3 235 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 MSNP26038 577 aaKnown RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 CHRNA5P30532 468 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 SHMT1P34896 483 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 SARSP49591 514 aaKnown RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 SCNN1DP51172 638 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 ATP2C1P98194 919 aaPredicted RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 ZRSR1Q15695 479 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms