RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
PFDN5-220ENST00000628881 GOPCQ9HD26 462 aa16.19■□□□□ 0.18
PFDN5-220ENST00000628881 TOMM22Q9NS69 142 aa16.19■□□□□ 0.18
PFDN5-220ENST00000628881 MTMR4Q9NYA4 1195 aa16.19■□□□□ 0.18
PFDN5-220ENST00000628881 MYH4Q9Y623 1939 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 TTLL1O95922 423 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 HERVK_113P62684 666 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 PTH1RQ03431 593 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 KIF22Q14807 665 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 ARHGEF6Q15052 776 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 FAM110CQ1W6H9 321 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 RRP12Q5JTH9 1297 aaKnown RBP16.18■□□□□ 0.18
PFDN5-220ENST00000628881 KIAA1755Q5JYT7 1200 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 PPP4R3BQ5MIZ7 849 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
PFDN5-220ENST00000628881 P2RX7Q99572 595 aaKnown RBP16.18■□□□□ 0.18
PFDN5-220ENST00000628881 ESYT1Q9BSJ8 1104 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 MCOLN1Q9GZU1 580 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 SYNPO2Q9UMS6 1093 aa16.18■□□□□ 0.18
PFDN5-220ENST00000628881 WDR46O15213 610 aaKnown RBP16.17■□□□□ 0.18
PFDN5-220ENST00000628881 CDC45O75419 566 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 NT5C2P49902 561 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 CAP1Q01518 475 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 PKN2Q16513 984 aaKnown RBP16.17■□□□□ 0.18
PFDN5-220ENST00000628881 OTOP1Q7RTM1 612 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 MKL1Q969V6 931 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 EFCC1Q9HA90 598 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 CLIP2Q9UDT6 1046 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 TRIM17Q9Y577 477 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
PFDN5-220ENST00000628881 ZSWIM8A7E2V4 1837 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 NEDD4P46934 1319 aa16.17■□□□□ 0.18
PFDN5-220ENST00000628881 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 KIAA1211Q6ZU35 1233 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 SPICE1Q8N0Z3 855 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 MAP4K1Q92918 833 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 ARHGAP39Q9C0H5 1083 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
PFDN5-220ENST00000628881 F5H6K3 240 aa16.15■□□□□ 0.18
PFDN5-220ENST00000628881 GNRH1P01148 92 aa16.15■□□□□ 0.18
PFDN5-220ENST00000628881 NOVP48745 357 aa16.15■□□□□ 0.18
PFDN5-220ENST00000628881 KLRC3Q07444 240 aa16.15■□□□□ 0.18
PFDN5-220ENST00000628881 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
PFDN5-220ENST00000628881 ESR2Q92731 530 aa16.15■□□□□ 0.18
PFDN5-220ENST00000628881 TCP11L1Q9NUJ3 509 aa16.15■□□□□ 0.18
PFDN5-220ENST00000628881 MGAMO43451 1857 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
PFDN5-220ENST00000628881 RAD21O60216 631 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 NMT2O60551 498 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 NDUFB10O96000 172 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 CTGFP29279 349 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 PSMC4P43686 418 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 FCGRTP55899 365 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 COG2Q14746 738 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 FBXO46Q6PJ61 603 aaPredicted RBP16.14■□□□□ 0.17
PFDN5-220ENST00000628881 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
PFDN5-220ENST00000628881 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 LSG1Q9H089 658 aaKnown RBP16.14■□□□□ 0.17
PFDN5-220ENST00000628881 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 STX8Q9UNK0 236 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 MYPNQ86TC9 1320 aa16.14■□□□□ 0.17
PFDN5-220ENST00000628881 RLFQ13129 1914 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 PARP14Q460N5 1801 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 FMNL1O95466 1100 aaPredicted RBP16.13■□□□□ 0.17
PFDN5-220ENST00000628881 CYP21A2P08686 494 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 GPRC5AQ8NFJ5 357 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 KRT23Q9C075 422 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 TXNRD2Q9NNW7 524 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 HOXC10Q9NYD6 342 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 RBPJLQ9UBG7 517 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
PFDN5-220ENST00000628881 A0A0G2JMZ2 1700 aa16.13■□□□□ 0.17
PFDN5-220ENST00000628881 B4E1Z4 1266 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 FLOT1O75955 427 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
PFDN5-220ENST00000628881 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 ERVK-24P63145 666 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 POTEEQ6S8J3 1075 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 PTPN22Q9Y2R2 807 aa16.12■□□□□ 0.17
PFDN5-220ENST00000628881 TNPO2O14787 897 aaKnown RBP16.11■□□□□ 0.17
PFDN5-220ENST00000628881 PEX10O60683 326 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 KDM4AO75164 1064 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 CNMDO75829 334 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 HOXD10P28358 340 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 DSG3P32926 999 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 PRMT2P55345 433 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 IQCA1Q86XH1 822 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 ABHD8Q96I13 439 aa16.11■□□□□ 0.17
PFDN5-220ENST00000628881 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
PFDN5-220ENST00000628881 FBXO28Q9NVF7 368 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms