RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 KIF22Q14807 665 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 SEPT2Q15019 361 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 CREB3L3Q68CJ9 461 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 POTEEQ6S8J3 1075 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 SMCR8Q8TEV9 937 aaPredicted RBP17.38■□□□□ 0.37
PNKP-221ENST00000627317 CNNM2Q9H8M5 875 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 PNMA3Q9UL41 463 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 TACC3Q9Y6A5 838 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 PLIN4Q96Q06 1357 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 FGRP09769 529 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 OSBPP22059 807 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 TFAP4Q01664 338 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 ICA1Q05084 483 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 TRDNQ13061 729 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 NECTIN1Q15223 517 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 FAM110CQ1W6H9 321 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 FAM47AQ5JRC9 791 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 RALYLQ86SE5 291 aaKnown RBP17.37■□□□□ 0.37
PNKP-221ENST00000627317 ACER1Q8TDN7 264 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 ESR2Q92731 530 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 ZNF333Q96JL9 665 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 KRT23Q9C075 422 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 SRRDQ9UH36 339 aa17.37■□□□□ 0.37
PNKP-221ENST00000627317 EPB41L2O43491 1005 aaKnown RBP17.36■□□□□ 0.37
PNKP-221ENST00000627317 MCCP23508 829 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 GCLCP48506 637 aaPredicted RBP17.36■□□□□ 0.37
PNKP-221ENST00000627317 NT5C2P49902 561 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 PRMT2P55345 433 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 PABPC4Q13310 644 aaKnown RBP eCLIP17.36■□□□□ 0.37
PNKP-221ENST00000627317 CLEC10AQ8IUN9 316 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 ANKRD13CQ8N6S4 541 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 FEZ1Q99689 392 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 TMOD4Q9NZQ9 345 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 MORF4L1Q9UBU8 362 aa17.36■□□□□ 0.37
PNKP-221ENST00000627317 MKI67P46013 3256 aaKnown RBP17.36■□□□□ 0.37
PNKP-221ENST00000627317 GREB1LQ9C091 1923 aaPredicted RBP17.35■□□□□ 0.37
PNKP-221ENST00000627317 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 B4E1Z4 1266 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 E7EWF7 191 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
PNKP-221ENST00000627317 FCGRTP55899 365 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 ATP2B2Q01814 1243 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 USP17L2Q6R6M4 530 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 SIAH1Q8IUQ4 282 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 ARHGEF10LQ9HCE6 1279 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
PNKP-221ENST00000627317 RBBP6Q7Z6E9 1792 aaKnown RBP17.35■□□□□ 0.37
PNKP-221ENST00000627317 KDM4AO75164 1064 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 VCAM1P19320 739 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 PRKCZQ05513 592 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 PPP4R3BQ5MIZ7 849 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 NCOA7Q8NI08 942 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 P2RX7Q99572 595 aaKnown RBP17.34■□□□□ 0.37
PNKP-221ENST00000627317 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
PNKP-221ENST00000627317 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 SH2D4AQ9H788 454 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 TXNRD2Q9NNW7 524 aa17.34■□□□□ 0.37
PNKP-221ENST00000627317 MYPNQ86TC9 1320 aa17.33■□□□□ 0.36
PNKP-221ENST00000627317 ECM2O94769 699 aaPredicted RBP17.33■□□□□ 0.36
PNKP-221ENST00000627317 FMNL1O95466 1100 aaPredicted RBP17.33■□□□□ 0.36
PNKP-221ENST00000627317 HSPA4P34932 840 aa17.33■□□□□ 0.36
PNKP-221ENST00000627317 HERVK_113P62684 666 aa17.33■□□□□ 0.36
PNKP-221ENST00000627317 KRT32Q14532 448 aa17.33■□□□□ 0.36
PNKP-221ENST00000627317 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.36
PNKP-221ENST00000627317 STOX1Q6ZVD7 989 aa17.33■□□□□ 0.36
PNKP-221ENST00000627317 CEP95Q96GE4 821 aa17.33■□□□□ 0.36
PNKP-221ENST00000627317 IGKV6D-41A0A0C4DH26 115 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 POTEFA5A3E0 1075 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
PNKP-221ENST00000627317 USP14P54578 494 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 IRX3P78415 501 aaPredicted RBP17.32■□□□□ 0.36
PNKP-221ENST00000627317 MLLT1Q03111 559 aaPredicted RBP17.32■□□□□ 0.36
PNKP-221ENST00000627317 ZYXQ15942 572 aaKnown RBP17.32■□□□□ 0.36
PNKP-221ENST00000627317 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 IQCA1Q86XH1 822 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 SH3TC2Q8TF17 1288 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 MTMR4Q9NYA4 1195 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
PNKP-221ENST00000627317 MGAMO43451 1857 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 PEX10O60683 326 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 SEC24BO95487 1268 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 TTLL1O95922 423 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 HOXD10P28358 340 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 LBX2Q6XYB7 198 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 RASEFQ8IZ41 740 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 UBAC1Q9BSL1 405 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 RBPJLQ9UBG7 517 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 STX8Q9UNK0 236 aa17.31■□□□□ 0.36
PNKP-221ENST00000627317 TNPO2O14787 897 aaKnown RBP17.3■□□□□ 0.36
PNKP-221ENST00000627317 NMT2O60551 498 aa17.3■□□□□ 0.36
PNKP-221ENST00000627317 CNMDO75829 334 aa17.3■□□□□ 0.36
PNKP-221ENST00000627317 IRF5Q13568 498 aa17.3■□□□□ 0.36
PNKP-221ENST00000627317 CCDC178Q5BJE1 867 aa17.3■□□□□ 0.36
PNKP-221ENST00000627317 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
PNKP-221ENST00000627317 ZKSCAN3Q9BRR0 538 aa17.3■□□□□ 0.36
PNKP-221ENST00000627317 TCP11L1Q9NUJ3 509 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms