RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 XBP1P17861 261 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 CLCN6P51797 869 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 NUBP1P53384 320 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 GRM4Q14833 912 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 KIF4BQ2VIQ3 1234 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 SKOR2Q2VWA4 1001 aaPredicted RBP8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 NBPF9Q3BBW0 867 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 TMEM179Q6ZVK1 233 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 TMTC3Q6ZXV5 915 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 CDC37L1Q7L3B6 337 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 FBXO18Q8NFZ0 1043 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 PHKBQ93100 1093 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 DNAJC18Q9H819 358 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 KANSL2Q9H9L4 492 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 GPRC5DQ9NZD1 345 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 RNF181Q9P0P0 153 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 CDK5RAP2Q96SN8 1893 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 PRPF3O43395 683 aaKnown RBP8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 FUT2Q10981 343 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 RESTQ13127 1097 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 ABCB5Q2M3G0 1257 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 ATL3Q6DD88 541 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 HOOK2Q96ED9 719 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 CABP5Q9NP86 173 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 NYAP2Q9P242 653 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 SYNPO2Q9UMS6 1093 aa8.74□□□□□ -1.01
PTP4A1-206ENST00000627002 ECM29Q5VYK3 1845 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 SHTN1A0MZ66 631 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 PLEKHA8P1O95397 391 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 PARP1P09874 1014 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 SMARCA1P28370 1054 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 LMOD1P29536 600 aaPredicted RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 FOSBP53539 338 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 KRT85P78386 507 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 MAP3K10Q02779 954 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 RASA3Q14644 834 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 SAFBQ15424 915 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 TBC1D10BQ4KMP7 808 aaPredicted RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 ASPRV1Q53RT3 343 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 C9orf131Q5VYM1 1079 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 SAMD7Q7Z3H4 446 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 BRAPQ7Z569 592 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 APOBEC3FQ8IUX4 373 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 SRBD1Q8N5C6 995 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 DNAJC5GQ8N7S2 189 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 RBM46Q8TBY0 533 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 MKL1Q969V6 931 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 ZNF396Q96N95 335 aaPredicted RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 TMEM39BQ9GZU3 492 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 CLIP2Q9UDT6 1046 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 MAD2L2Q9UI95 211 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 HACL1Q9UJ83 578 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 PPP2R3BQ9Y5P8 575 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 MYH1P12882 1939 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 CNTNAP5Q8WYK1 1306 aa8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 ZC3H4Q9UPT8 1303 aaKnown RBP8.73□□□□□ -1.01
PTP4A1-206ENST00000627002 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 FAM196BA6NMK8 535 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 EGFRP00533 1210 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 SNHG28P0DPA3 235 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 GUCY1B3Q02153 619 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 ICA1Q05084 483 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 DNM1Q05193 864 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 GNL2Q13823 731 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 GPATCH4Q5T3I0 446 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 KRT40Q6A162 431 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 DPY19L2Q6NUT2 758 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 FAM177A1Q8N128 213 aaPredicted RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 CMTR1Q8N1G2 835 aaKnown RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 CCDC82Q8N4S0 544 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 KLRG1Q96E93 195 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 SPZ1Q9BXG8 430 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 SCAND2PQ9GZW5 306 aaPredicted RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 PGAP2Q9UHJ9 254 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 CFAP45Q9UL16 551 aa8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
PTP4A1-206ENST00000627002 KLRF2D3W0D1 207 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 TRAK2O60296 914 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 PRPF40AO75400 957 aaKnown RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 GDF11O95390 407 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 GH2P01242 217 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 MMP1P03956 469 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 PDHBP11177 359 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 SCG2P13521 617 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 EEF2P13639 858 aaKnown RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 VASPP50552 380 aaPredicted RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 ATP2B2Q01814 1243 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 KIF23Q02241 960 aaPredicted RBP8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 FSTL1Q12841 308 aa8.71□□□□□ -1.02
PTP4A1-206ENST00000627002 SEPT2Q15019 361 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms