RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 PALM3A6NDB9 673 aaPredicted RBP11.9□□□□□ -0.5
CHD2-207ENST00000626782 FAM196BA6NMK8 535 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 RBM43Q6ZSC3 357 aaKnown RBP11.9□□□□□ -0.5
CHD2-207ENST00000626782 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
CHD2-207ENST00000626782 RNF214Q8ND24 703 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 PIBF1Q8WXW3 757 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 PRMT6Q96LA8 375 aaPredicted RBP11.9□□□□□ -0.5
CHD2-207ENST00000626782 IDI2Q9BXS1 227 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 FOXP1Q9H334 677 aaPredicted RBP11.9□□□□□ -0.5
CHD2-207ENST00000626782 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 TSPY26PQ9H489 355 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 ZNF287Q9HBT7 754 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 PSMD14O00487 310 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 WNT7AO00755 349 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 SPTLC2O15270 562 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 GOLGA8HP0CJ92 632 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 RBM5P52756 815 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHD2-207ENST00000626782 SLC39A14Q15043 492 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 STK38Q15208 465 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 ADALQ6DHV7 355 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 TNFRSF25Q93038 417 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 SYT17Q9BSW7 474 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 NUP62CLQ9H1M0 184 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 CLSTN2Q9H4D0 955 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 TDRD3Q9H7E2 651 aaKnown RBP11.9□□□□□ -0.5
CHD2-207ENST00000626782 MTMR4Q9NYA4 1195 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
CHD2-207ENST00000626782 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
CHD2-207ENST00000626782 MYH4Q9Y623 1939 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
CHD2-207ENST00000626782 PFKFB3Q16875 520 aaPredicted RBP11.89□□□□□ -0.51
CHD2-207ENST00000626782 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 RSBN1LQ6PCB5 846 aaPredicted RBP11.89□□□□□ -0.51
CHD2-207ENST00000626782 KCNG4Q8TDN1 519 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 DDX19AQ9NUU7 478 aaKnown RBP11.89□□□□□ -0.51
CHD2-207ENST00000626782 VIL1P09327 827 aaKnown RBP11.89□□□□□ -0.51
CHD2-207ENST00000626782 SCG2P13521 617 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 KIF5BP33176 963 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 CCDC178Q5BJE1 867 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 FMR1NBQ8N0W7 255 aaPredicted RBP11.89□□□□□ -0.51
CHD2-207ENST00000626782 FSIP1Q8NA03 581 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 EHD4Q9H223 541 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 TAOK3Q9H2K8 898 aa11.89□□□□□ -0.51
CHD2-207ENST00000626782 MYO3BQ8WXR4 1341 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 A0A1B0GVL5 298 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 A0A1W2PQ27 194 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 A0A1W2PQ64 194 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 A0A1W2PQD8 194 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 SHTN1A0MZ66 631 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
CHD2-207ENST00000626782 TOP1P11387 765 aaKnown RBP11.88□□□□□ -0.51
CHD2-207ENST00000626782 NDUFA8P51970 172 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 EIF6P56537 245 aaKnown RBP11.88□□□□□ -0.51
CHD2-207ENST00000626782 AKAP17AQ02040 695 aaKnown RBP11.88□□□□□ -0.51
CHD2-207ENST00000626782 GNL2Q13823 731 aaKnown RBP11.88□□□□□ -0.51
CHD2-207ENST00000626782 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.512e-11■■□□□ 12.7
CHD2-207ENST00000626782 PCDHB6Q9Y5E3 794 aa11.88□□□□□ -0.51
CHD2-207ENST00000626782 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
CHD2-207ENST00000626782 YBX3P16989 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHD2-207ENST00000626782 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHD2-207ENST00000626782 LRRC47Q8N1G4 583 aaKnown RBP11.87□□□□□ -0.51
CHD2-207ENST00000626782 MRPS27Q92552 414 aaKnown RBP11.87□□□□□ -0.51
CHD2-207ENST00000626782 TNMDQ9H2S6 317 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 CABP5Q9NP86 173 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 ATRNL1Q5VV63 1379 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 PPP6R2O75170 966 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 GRIN1Q05586 938 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
CHD2-207ENST00000626782 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
CHD2-207ENST00000626782 KLRF2D3W0D1 207 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 PDHBP11177 359 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 KRT2P35908 639 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 JAG1P78504 1218 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 CXCL9Q07325 125 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 SOGA3Q5TF21 947 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 ARHGAP27Q6ZUM4 889 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
CHD2-207ENST00000626782 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 HLA-DOAP06340 250 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 RRP1BQ14684 758 aaKnown RBP11.86□□□□□ -0.51
CHD2-207ENST00000626782 RILPL1Q5EBL4 403 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 TATDN1Q6P1N9 297 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
CHD2-207ENST00000626782 SPZ1Q9BXG8 430 aa11.86□□□□□ -0.51
CHD2-207ENST00000626782 DHX36Q9H2U1 1008 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms