RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 COG2Q14746 738 aa26.63■■□□□ 1.85
SF1-220ENST00000626028 ALX1Q15699 326 aa26.63■■□□□ 1.85
SF1-220ENST00000626028 ZNF444Q8N0Y2 327 aaPredicted RBP26.63■■□□□ 1.85
SF1-220ENST00000626028 PDE4DIPQ5VU43 2346 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 HIP1O00291 1037 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 CCNA1P78396 465 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 RILPL2Q969X0 211 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 GOPCQ9HD26 462 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 TXNRD2Q9NNW7 524 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 NYAP2Q9P242 653 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 GABRQQ9UN88 632 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 ZMYM6O95789 1325 aa26.62■■□□□ 1.85
SF1-220ENST00000626028 BRCA2P51587 3418 aa26.61■■□□□ 1.85
SF1-220ENST00000626028 WDR46O15213 610 aaKnown RBP26.61■■□□□ 1.85
SF1-220ENST00000626028 EEF2P13639 858 aaKnown RBP26.61■■□□□ 1.85
SF1-220ENST00000626028 PPARAQ07869 468 aa26.61■■□□□ 1.85
SF1-220ENST00000626028 SH3TC2Q8TF17 1288 aa26.61■■□□□ 1.85
SF1-220ENST00000626028 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.61■■□□□ 1.85
SF1-220ENST00000626028 ANAPC4Q9UJX5 808 aa26.61■■□□□ 1.85
SF1-220ENST00000626028 PLIN4Q96Q06 1357 aa26.6■■□□□ 1.85
SF1-220ENST00000626028 FOXP2O15409 715 aa26.6■■□□□ 1.85
SF1-220ENST00000626028 ADCY3O60266 1144 aa26.6■■□□□ 1.85
SF1-220ENST00000626028 ECM2O94769 699 aaPredicted RBP26.6■■□□□ 1.85
SF1-220ENST00000626028 UBXN2AP68543 259 aa26.6■■□□□ 1.85
SF1-220ENST00000626028 PPP4R3BQ5MIZ7 849 aa26.6■■□□□ 1.85
SF1-220ENST00000626028 MB21D1Q8N884 522 aa26.6■■□□□ 1.85
SF1-220ENST00000626028 SOCS4Q8WXH5 440 aa26.6■■□□□ 1.85
SF1-220ENST00000626028 COL11A1P12107 1806 aaPredicted RBP26.6■■□□□ 1.85
SF1-220ENST00000626028 SPDYE16A6NNV3 312 aaPredicted RBP26.59■■□□□ 1.85
SF1-220ENST00000626028 CAPN2P17655 700 aa26.59■■□□□ 1.85
SF1-220ENST00000626028 SDSP20132 328 aa26.59■■□□□ 1.85
SF1-220ENST00000626028 IRX6P78412 446 aaPredicted RBP26.59■■□□□ 1.85
SF1-220ENST00000626028 CCDC129Q6ZRS4 1044 aa26.59■■□□□ 1.85
SF1-220ENST00000626028 CCAR1Q8IX12 1150 aaKnown RBP26.59■■□□□ 1.85
SF1-220ENST00000626028 FAM227BQ96M60 508 aa26.59■■□□□ 1.85
SF1-220ENST00000626028 TANGO6Q9C0B7 1094 aa26.59■■□□□ 1.85
SF1-220ENST00000626028 IGKV6D-41A0A0C4DH26 115 aa26.58■■□□□ 1.85
SF1-220ENST00000626028 A0A0D9SFI3 127 aa26.58■■□□□ 1.85
SF1-220ENST00000626028 POTEEQ6S8J3 1075 aa26.58■■□□□ 1.85
SF1-220ENST00000626028 GJD2Q9UKL4 321 aa26.58■■□□□ 1.85
SF1-220ENST00000626028 CCDC171Q6TFL3 1326 aa26.58■■□□□ 1.85
SF1-220ENST00000626028 LAMA4Q16363 1823 aa26.58■■□□□ 1.84
SF1-220ENST00000626028 XRCC5P13010 732 aaKnown RBP26.57■■□□□ 1.84
SF1-220ENST00000626028 NMIQ13287 307 aaPredicted RBP26.57■■□□□ 1.84
SF1-220ENST00000626028 CLEC10AQ8IUN9 316 aa26.57■■□□□ 1.84
SF1-220ENST00000626028 NEDD1Q8NHV4 660 aa26.57■■□□□ 1.84
SF1-220ENST00000626028 MKL1Q969V6 931 aa26.57■■□□□ 1.84
SF1-220ENST00000626028 PAGR1Q9BTK6 254 aa26.57■■□□□ 1.84
SF1-220ENST00000626028 POTEFA5A3E0 1075 aa26.56■■□□□ 1.84
SF1-220ENST00000626028 ATP2B2Q01814 1243 aa26.56■■□□□ 1.84
SF1-220ENST00000626028 Q3C1V9 767 aa26.56■■□□□ 1.84
SF1-220ENST00000626028 KIAA1755Q5JYT7 1200 aa26.56■■□□□ 1.84
SF1-220ENST00000626028 NKX2-3Q8TAU0 364 aa26.56■■□□□ 1.84
SF1-220ENST00000626028 NUDT12Q9BQG2 462 aa26.56■■□□□ 1.84
SF1-220ENST00000626028 ZNF236Q9UL36 1845 aa26.55■■□□□ 1.84
SF1-220ENST00000626028 ZNFX1Q9P2E3 1918 aaKnown RBP26.55■■□□□ 1.84
SF1-220ENST00000626028 CNMDO75829 334 aa26.55■■□□□ 1.84
SF1-220ENST00000626028 TSPY3P0CV98 308 aa26.55■■□□□ 1.84
SF1-220ENST00000626028 TSPY8P0CW00 308 aa26.55■■□□□ 1.84
SF1-220ENST00000626028 HSPD1P10809 573 aaKnown RBP26.55■■□□□ 1.84
SF1-220ENST00000626028 VPS53Q5VIR6 699 aa26.55■■□□□ 1.84
SF1-220ENST00000626028 TRMT44Q8IYL2 757 aaKnown RBP26.55■■□□□ 1.84
SF1-220ENST00000626028 DIAPH3Q9NSV4 1193 aa26.55■■□□□ 1.84
SF1-220ENST00000626028 MTMR4Q9NYA4 1195 aa26.55■■□□□ 1.84
SF1-220ENST00000626028 BIN2Q9UBW5 565 aaPredicted RBP26.55■■□□□ 1.84
SF1-220ENST00000626028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.55■■□□□ 1.84
SF1-220ENST00000626028 FLOT1O75955 427 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 TTLL1O95922 423 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 FGRP09769 529 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 PCP11498 1178 aaKnown RBP26.54■■□□□ 1.84
SF1-220ENST00000626028 DSG3P32926 999 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 GPR142Q7Z601 462 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 PLEKHH3Q7Z736 793 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 SPICE1Q8N0Z3 855 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 STK11IPQ8N1F8 1099 aa26.54■■□□□ 1.84
SF1-220ENST00000626028 ORC4O43929 436 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 PRDM1O75626 825 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 FGAP02671 866 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 NT5C2P49902 561 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 CEP95Q96GE4 821 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 PORCNQ9H237 461 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 BTBD7Q9P203 1132 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 ADAMTS5Q9UNA0 930 aa26.53■■□□□ 1.84
SF1-220ENST00000626028 GJB1P08034 283 aa26.52■■□□□ 1.84
SF1-220ENST00000626028 PDE4AP27815 886 aa26.52■■□□□ 1.84
SF1-220ENST00000626028 ZNF589Q86UQ0 364 aaPredicted RBP26.52■■□□□ 1.84
SF1-220ENST00000626028 SHCBP1Q8NEM2 672 aa26.52■■□□□ 1.84
SF1-220ENST00000626028 CLIP2Q9UDT6 1046 aa26.52■■□□□ 1.84
SF1-220ENST00000626028 MKI67P46013 3256 aaKnown RBP26.52■■□□□ 1.84
SF1-220ENST00000626028 F5H6K3 240 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 HMGCRP04035 888 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 CCL5P13501 91 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 TFAP4Q01664 338 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 KLRC3Q07444 240 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 MORN1Q5T089 497 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 TTC22Q5TAA0 569 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 GMCL1P1Q8NEA9 526 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 USP6NLQ92738 828 aa26.51■■□□□ 1.83
SF1-220ENST00000626028 CWC22Q9HCG8 908 aaKnown RBP26.51■■□□□ 1.83
SF1-220ENST00000626028 STRNO43815 780 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms