RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 CLK4Q9HAZ1 481 aaKnown RBP5.77□□□□□ -1.49
CHD2-204ENST00000625463 CASS4Q9NQ75 786 aa5.77□□□□□ -1.49
CHD2-204ENST00000625463 KLC4Q9NSK0 619 aa5.77□□□□□ -1.49
CHD2-204ENST00000625463 LMBRD1Q9NUN5 540 aa5.77□□□□□ -1.49
CHD2-204ENST00000625463 FKBP14Q9NWM8 211 aa5.77□□□□□ -1.49
CHD2-204ENST00000625463 AATFQ9NY61 560 aaKnown RBP eCLIP5.77□□□□□ -1.49
CHD2-204ENST00000625463 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.77□□□□□ -1.49
CHD2-204ENST00000625463 HOOK1Q9UJC3 728 aaKnown RBP5.77□□□□□ -1.49
CHD2-204ENST00000625463 ZNF777Q9ULD5 760 aaPredicted RBP5.77□□□□□ -1.49
CHD2-204ENST00000625463 ATAD2Q6PL18 1390 aa5.77□□□□□ -1.49
CHD2-204ENST00000625463 POLA1P09884 1462 aaPredicted RBP5.77□□□□□ -1.49
CHD2-204ENST00000625463 SCAF11Q99590 1463 aaKnown RBP5.77□□□□□ -1.49
CHD2-204ENST00000625463 KIF7Q2M1P5 1343 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SETD5Q9C0A6 1442 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 MAP3K1Q13233 1512 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 PALM3A6NDB9 673 aaPredicted RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 RASSF10A6NK89 507 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 C2orf81A6NN90 581 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 M0QX08 132 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 CPLX1O14810 134 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SNX2O60749 519 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SMIM24O75264 130 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 ATG7O95352 703 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 LDHAP00338 332 aaKnown RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 FGAP02671 866 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 VIMP08670 466 aaKnown RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 CASTP20810 708 aaKnown RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 PTPREP23469 700 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 HSPA1LP34931 641 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 HSPA4P34932 840 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 TSPAN7P41732 249 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 UBXN2AP68543 259 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 STIM1Q13586 685 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SEPT6Q14141 434 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 COG2Q14746 738 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 PTPN14Q15678 1187 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 TTC39BQ5VTQ0 682 aaPredicted RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 IRGCQ6NXR0 463 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SND1Q7KZF4 910 aaKnown RBP eCLIP5.76□□□□□ -1.49
CHD2-204ENST00000625463 MCM10Q7L590 875 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 NOP9Q86U38 636 aaKnown RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 SESTD1Q86VW0 696 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SLC15A3Q8IY34 581 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 LRRC43Q8N309 656 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 TMCO5AQ8N6Q1 288 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 CCHCR1Q8TD31 782 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 HELQQ8TDG4 1101 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 DIS3LQ8TF46 1054 aaKnown RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 OPTNQ96CV9 577 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 CLIP3Q96DZ5 547 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 ASIC4Q96FT7 647 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 TMX3Q96JJ7 454 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 RPGRIP1Q96KN7 1286 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SMC6Q96SB8 1091 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 USP26Q9BXU7 913 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 YIPF3Q9GZM5 350 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 CNNM2Q9H8M5 875 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 VCX3AQ9NNX9 186 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 SLC39A2Q9NP94 309 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 FAM217BQ9NTX9 383 aaPredicted RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 RTEL1Q9NZ71 1219 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 DDX20Q9UHI6 824 aaKnown RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 DNAI1Q9UI46 699 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 MTUS1Q9ULD2 1270 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 PYCARDQ9ULZ3 195 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 EXOC6BQ9Y2D4 811 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 R3HDM2Q9Y2K5 976 aaKnown RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 SH3GLB1Q9Y371 365 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 CAPN7Q9Y6W3 813 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 FAM169AQ9Y6X4 670 aa5.76□□□□□ -1.49
CHD2-204ENST00000625463 POLR1AO95602 1720 aaPredicted RBP5.76□□□□□ -1.49
CHD2-204ENST00000625463 MYPNQ86TC9 1320 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 CLIP1P30622 1438 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 PSDA5PKW4 1024 aaPredicted RBP5.75□□□□□ -1.49
CHD2-204ENST00000625463 PPP1R3GB7ZBB8 358 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 STXBP3O00186 592 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 PRC1O43663 620 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 AKR1B10O60218 316 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 SKAP2O75563 359 aaPredicted RBP5.75□□□□□ -1.49
CHD2-204ENST00000625463 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 CYP1A2P05177 515 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 ATP5JP18859 108 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 POLR2EP19388 210 aaKnown RBP5.75□□□□□ -1.49
CHD2-204ENST00000625463 ALDH3A1P30838 453 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 HOXC13P31276 330 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 PRKAR2BP31323 418 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 GNL1P36915 607 aaPredicted RBP5.75□□□□□ -1.49
CHD2-204ENST00000625463 SNX16P57768 344 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 TUBB4BP68371 445 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 CDK17Q00537 523 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 NAA30Q147X3 362 aaPredicted RBP5.75□□□□□ -1.49
CHD2-204ENST00000625463 TNIP1Q15025 636 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 PROX2Q3B8N5 592 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 CCDC93Q567U6 631 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 GALNT17Q6IS24 598 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 KANK3Q6NY19 840 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 MAATS1Q7Z4T9 603 aa5.75□□□□□ -1.49
CHD2-204ENST00000625463 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.75□□□□□ -1.49
CHD2-204ENST00000625463 YTHDF3Q7Z739 585 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms