RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 ZSCAN16Q9H4T2 348 aaPredicted RBP13.69□□□□□ -0.22
LINC00963-220ENST00000625171 ADARB2Q9NS39 739 aaKnown RBP13.69□□□□□ -0.22
LINC00963-220ENST00000625171 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
LINC00963-220ENST00000625171 EGFRP00533 1210 aa13.68□□□□□ -0.22
LINC00963-220ENST00000625171 PTMSP20962 102 aa13.68□□□□□ -0.22
LINC00963-220ENST00000625171 LBX1P52954 281 aa13.68□□□□□ -0.22
LINC00963-220ENST00000625171 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
LINC00963-220ENST00000625171 PKP1Q13835 747 aa13.68□□□□□ -0.22
LINC00963-220ENST00000625171 TMTC3Q6ZXV5 915 aa13.68□□□□□ -0.22
LINC00963-220ENST00000625171 FBXO18Q8NFZ0 1043 aa13.68□□□□□ -0.22
LINC00963-220ENST00000625171 ZC3H15Q8WU90 426 aaKnown RBP13.68□□□□□ -0.22
LINC00963-220ENST00000625171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC00963-220ENST00000625171 ORC3Q9UBD5 711 aaPredicted RBP13.68□□□□□ -0.22
LINC00963-220ENST00000625171 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
LINC00963-220ENST00000625171 DEXIO95424 95 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 F13A1P00488 732 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 HSPA8P11142 646 aaKnown RBP13.67□□□□□ -0.22
LINC00963-220ENST00000625171 EPHX2P34913 555 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 EPS15P42566 896 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 DEFB115Q30KQ5 88 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-220ENST00000625171 EAPPQ56P03 285 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-220ENST00000625171 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
LINC00963-220ENST00000625171 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 USP50Q70EL3 339 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-220ENST00000625171 TRIM22Q8IYM9 498 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 DEFB129Q9H1M3 183 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 VEZTQ9HBM0 779 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 CABP5Q9NP86 173 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 STX8Q9UNK0 236 aa13.67□□□□□ -0.22
LINC00963-220ENST00000625171 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-220ENST00000625171 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 MCM4P33991 863 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 HIRAP54198 1017 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-220ENST00000625171 NFKBIBQ15653 356 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 SIAH1Q8IUQ4 282 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 SPZ1Q9BXG8 430 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 MAD2L2Q9UI95 211 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 ZNF112Q9UJU3 913 aa13.66□□□□□ -0.22
LINC00963-220ENST00000625171 PHF20L1A8MW92 1017 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
LINC00963-220ENST00000625171 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
LINC00963-220ENST00000625171 CAP2P40123 477 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 ASPRV1Q53RT3 343 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 GPATCH4Q5T3I0 446 aaKnown RBP13.65□□□□□ -0.22
LINC00963-220ENST00000625171 GMCL1P1Q8NEA9 526 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 NUP133Q8WUM0 1156 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 DDX11Q96FC9 970 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
LINC00963-220ENST00000625171 THSD7BQ9C0I4 1608 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 ASNSP08243 561 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 PDHBP11177 359 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 RXRAP19793 462 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 PKN1Q16512 942 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 SUPT20HL1Q3ZLR7 823 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 DCAF15Q66K64 600 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 SRBD1Q8N5C6 995 aaKnown RBP13.64□□□□□ -0.23
LINC00963-220ENST00000625171 TRPM4Q8TD43 1214 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 RIOX1Q9H6W3 641 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 SH3GLB2Q9NR46 395 aa13.64□□□□□ -0.23
LINC00963-220ENST00000625171 DDX11L8A8MPP1 907 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 H3BQV1 296 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
LINC00963-220ENST00000625171 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
LINC00963-220ENST00000625171 XBP1P17861 261 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00963-220ENST00000625171 RRP1BQ14684 758 aaKnown RBP13.63□□□□□ -0.23
LINC00963-220ENST00000625171 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
LINC00963-220ENST00000625171 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 ZNF713Q8N859 430 aaPredicted RBP13.63□□□□□ -0.23
LINC00963-220ENST00000625171 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 PHKBQ93100 1093 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 GMCL1Q96IK5 515 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 ALG1Q9BT22 464 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
LINC00963-220ENST00000625171 TMX2Q9Y320 296 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 CNTNAP5Q8WYK1 1306 aa13.63□□□□□ -0.23
LINC00963-220ENST00000625171 KLRF2D3W0D1 207 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 GOLGA6L22H0YM25 854 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 PLA2G6O60733 806 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 GH2P01242 217 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 ECE1P42892 770 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 RGS19P49795 217 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 AKAP17AQ02040 695 aaKnown RBP13.62□□□□□ -0.23
LINC00963-220ENST00000625171 ZNF543Q08ER8 600 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 RESTQ13127 1097 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 SEPT2Q15019 361 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-220ENST00000625171 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-220ENST00000625171 CDC37L1Q7L3B6 337 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 RAB11FIP4Q86YS3 637 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms